PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766355.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 489aa    MW: 54167.1 Da    PI: 5.6753
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.73.3e-1021034831374
            GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevs 88 
                     lv+lL+++Aea++  +++  la+ +L rl+el+sp++ ++m+Rlaayft AL+  l +s+ +  k l    p  + +e+++++ laa++l++++s
  XP_022766355.1 103 LVHLLMAAAEALTGANKSreLARVILVRLKELVSPNDgTNMERLAAYFTDALQGLLEGSGGGHGKHLitngPQHHRDEHHQTDMLAAFQLLQDMS 197
                     68**********986665559***********8887669******************987666665532114444444449************** PP

            GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
                     P++kf+h+taNqaIleav +++r+Hi+D+di++G+QW++L+qaL  R+egpp  +lRiT++++ +sg  s  +++etg+rL  fA+++g pf+f+
  XP_022766355.1 198 PYVKFGHFTANQAILEAVTHDRRIHIVDYDIMEGIQWASLMQALVFRKEGPPtpHLRITALSRGSSGrrSIGTIQETGRRLVAFAASIGQPFSFH 292
                     ************************************************887666*********999999999*********************** PP

            GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdslea 273
                         ++ e+++++++++ +gEal++n++l+l ++  +  ++     ++L+  k+l+P++v++ve+e+   +++ F+ rf++ l++ysa++dslea
  XP_022766355.1 293 QCRLDSDETFRPSAIKLVRGEALVINCMLHLPHFSYRAPDSV---ASFLSGAKTLKPRLVTLVEEEVGPiGDGGFVGRFMDLLHHYSAVYDSLEA 384
                     *9999****************************985555555...59*******************9988************************* PP

            GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrvee.esgslvlgWkdrpL 367
                     ++p + ++r+ vEr++lg++i   +a   + r+e  e     +e+l ++GFkp ++s  + +qaklll  ++ dgyrvee  ++ lvlgWk+r+L
  XP_022766355.1 385 GFPMQGRARSLVERVFLGPRIAGSLARIYRTREE--EDSCPCSEWLAAVGFKPDNISFANHCQAKLLLGLFN-DGYRVEEfANNKLVLGWKSRRL 476
                     ***************************9999665..455788999***************************.******626999********** PP

            GRAS 368 vsvSaWr 374
                     +s+S W+
  XP_022766355.1 477 LSASIWT 483
                     ******6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MAMAIDSAFD VNFSSYSTTT TITTTTTEDD PACTWNDWGS PIVDWDSLSR ERDEFQDLIE  60
SMMDDGTGLE LARVGHETSN SISTDTMFAD EETNGGDFKG LRLVHLLMAA AEALTGANKS  120
RELARVILVR LKELVSPNDG TNMERLAAYF TDALQGLLEG SGGGHGKHLI TNGPQHHRDE  180
HHQTDMLAAF QLLQDMSPYV KFGHFTANQA ILEAVTHDRR IHIVDYDIME GIQWASLMQA  240
LVFRKEGPPT PHLRITALSR GSSGRRSIGT IQETGRRLVA FAASIGQPFS FHQCRLDSDE  300
TFRPSAIKLV RGEALVINCM LHLPHFSYRA PDSVASFLSG AKTLKPRLVT LVEEEVGPIG  360
DGGFVGRFMD LLHHYSAVYD SLEAGFPMQG RARSLVERVF LGPRIAGSLA RIYRTREEED  420
SCPCSEWLAA VGFKPDNISF ANHCQAKLLL GLFNDGYRVE EFANNKLVLG WKSRRLLSAS  480
IWTSPDSDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-167GRAS family protein