PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022765372.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 341aa    MW: 37243.8 Da    PI: 6.8615
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022765372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.61.4e-17248281134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022765372.1 248 CIHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 281
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MIGPTNFIDE IDCGSFFDHI DDLLDFPNED AEVGLSASDV NAAAFPSIWT TNSESLPGSD  60
SVFSNNNASD LSAEISVPYE EIVQLEWLSN FVEDSHCGAS LTIKKEESFS INKESSRHQF  120
QSSSPISVLE SSSSCSGEKT LPRSPEMAAP GRRGRARSKR PRPATFNPRP GIQLISPTSS  180
VNENDIPQPF VFSKVPSDSE NYAESRLLIK IPRQVNPEHK KKKKIKLSLP AAPADNTQNP  240
SGPAVRKCIH CEITKTPQWR AGPMGPKTLC NACGVRYKSG RLFPEYRPAA SPTFVPSLHS  300
NSHKKVLEMR TKSGTAALTA TMVTNSPELI PNESNPALDY I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159163KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.27e-44GATA family protein