PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022764647.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 682aa MW: 75660.5 Da PI: 7.4694

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022764647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	69	90	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C + F ++ n++rHir+H XP_022764647.1 69 KCDKCLREFCSPINYRRHIRVH 90 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MSKSYVMKSE EPNDSLDTFI RQAIGKEPFL SFSRAADSPF QWIQLLHALD QQDHPGWPLL 60 TPLKVQMQKC DKCLREFCSP INYRRHIRVH HRLKKLDKDS AKNRDLLAAF WDKLSEEEVK 120 EIISFKDVSL EEVPGSSVIK SLTTLVKRPG FLPQVCLRAG SALLDIVQAR PSRFPISSQE 180 LFSILDDASE RTFLCGTAVS MQKYIFDGEA GKIGLETKNL VACTCFLVEQ KLVKAWLADK 240 DAEALRCQKL LVEEEEAAQK RQVELVERKR QKKLRQKEQK AKEQRHGEME EGKENMDDSL 300 EVNSPAETSS SLAAFDCDGQ NPVMSTDQVL PSEEPIHFSN PEEDADDEIQ MGFSNGYCDP 360 GTSQNVARRI EQVGGYRHIG VTRWQIPPKS QRGALNGFHS SQNSHGFKFG GMNKHGTNRE 420 RAAAIGSSNK IWSRKPKAVN DGKSLKTGAE KQAANQLDQN KNLEVLIGSI SVTLGNCSHQ 480 EGNNLAEARD RSLVECQIPN KNKVKEMSSK LDPVQGVTNR STIKFWRPVS QYGSKSSLQI 540 QIGVREFEVE AIAEKDGVQA SSDESCLRSC ATDGSNGVVS MNISTLEESV EAGSLQFDSH 600 AAKAFLGQRW KEAIAGEHVT LVLPPNLEPP GCSEVELDSS EKWTVKAGAF EASTGGVAKG 660 KLRTKPEKGA KIKYIPKQRS AT

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MSKSYVMKSE EPNDSLDTFI RQAIGKEPFL SFSRAADSPF QWIQLLHALD QQDHPGWPLL  60
TPLKVQMQKC DKCLREFCSP INYRRHIRVH HRLKKLDKDS AKNRDLLAAF WDKLSEEEVK  120
EIISFKDVSL EEVPGSSVIK SLTTLVKRPG FLPQVCLRAG SALLDIVQAR PSRFPISSQE  180
LFSILDDASE RTFLCGTAVS MQKYIFDGEA GKIGLETKNL VACTCFLVEQ KLVKAWLADK  240
DAEALRCQKL LVEEEEAAQK RQVELVERKR QKKLRQKEQK AKEQRHGEME EGKENMDDSL  300
EVNSPAETSS SLAAFDCDGQ NPVMSTDQVL PSEEPIHFSN PEEDADDEIQ MGFSNGYCDP  360
GTSQNVARRI EQVGGYRHIG VTRWQIPPKS QRGALNGFHS SQNSHGFKFG GMNKHGTNRE  420
RAAAIGSSNK IWSRKPKAVN DGKSLKTGAE KQAANQLDQN KNLEVLIGSI SVTLGNCSHQ  480
EGNNLAEARD RSLVECQIPN KNKVKEMSSK LDPVQGVTNR STIKFWRPVS QYGSKSSLQI  540
QIGVREFEVE AIAEKDGVQA SSDESCLRSC ATDGSNGVVS MNISTLEESV EAGSLQFDSH  600
AAKAFLGQRW KEAIAGEHVT LVLPPNLEPP GCSEVELDSS EKWTVKAGAF EASTGGVAKG  660
KLRTKPEKGA KIKYIPKQRS AT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	274	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-163	C2H2 family protein