PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022762545.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family Trihelix
Protein Properties Length: 664aa    MW: 72424.9 Da    PI: 8.2278
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022762545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix97.41.3e-3090174187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe+laL+++r++m+ ++r++  k+plWe+vs+k++e g++rs+k+Ckek+en++k+yk++keg+ +r++++s  +++f+qlea
  XP_022762545.1  90 RWPRQETLALLKIRSDMDATFRDATVKGPLWEDVSRKLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YKFFSQLEA 174
                     8*********************************************************************866665..*******85 PP
2trihelix103.81.3e-32493578187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k evlaLi++r+ +e+r+++   k+plWee+s+ m + g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf ql+a
  XP_022762545.1 493 RWPKAEVLALIDLRSGLESRYQEVGPKGPLWEEISAGMIRMGYKRSAKRCKEKWENINKYFKKVKESKKKR-PEDAKTCPYFYQLDA 578
                     8*********************************************************************8.99999*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 664 aa     Download sequence    
MQQGGGGGGG HQFQYREMGA PATGAVGSSH MVSEQSEQLV EEASPISSRP PATGNLDEFM  60
RLVSGGGGEV GDEGDQPEGG GVAGVASGNR WPRQETLALL KIRSDMDATF RDATVKGPLW  120
EDVSRKLAEL GYKRSAKKCK EKFENVHKYY KRTKEGRAGR QDGKSYKFFS QLEALHTPSA  180
TAAVNVSTSV TPVTAATSTS LDVAPVSIGI PMPISSARIP PTTAIPVPVP EPAPAPPITT  240
SAASFGICFS SNSSSSSQGF EDDDDDKDEL GGEPSSMAGT SRKRKRQSSG GGGNTNRRMM  300
EFFEGLMKQV MQKQEAMQQR FLEAIEKREQ DRMIREEAWK RQEMARLTSE HELMAQERAI  360
AASRDAAIIS FLQKITGQTI QLPTTVTVPT APLPPTQQAV PVVPPPAPPL HQPPSLPQQQ  420
RNSQQQQQSH SHQHQQQPQV VHQQQHQTQN TEVSRHHQQP VSSEEVMVIR EQQGPPQEIG  480
GSGSGSLEPA SSRWPKAEVL ALIDLRSGLE SRYQEVGPKG PLWEEISAGM IRMGYKRSAK  540
RCKEKWENIN KYFKKVKESK KKRPEDAKTC PYFYQLDALH RRKLLGSGGS SSFSDQNRPE  600
EETSRQHQDT SDAPQITTAP QLTQPTDQSE SKTGATADVL TSQECLPGSL FGEGNGGASK  660
KKTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133141KRSAKKCKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.13e-53Trihelix family protein