PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022762399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24410.9 Da PI: 7.6275 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.7 | 1.3e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqvtfskRr+g++KKA+ELS+LCdae+a+++fs tgkl+eyss XP_022762399.1 9 KKIDNVAARQVTFSKRRKGLFKKAHELSTLCDAEIALLVFSATGKLFEYSS 59 689**********************************************96 PP | |||||||
2 | K-box | 49.6 | 1.7e-17 | 90 | 172 | 17 | 99 |
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +a L ke+ + +e+R+l Ge+L+ L+l+eL++Le+ Le +l+++ ++K+e +++i++l++k el een+ L++++e XP_022762399.1 90 ESSTYAMLSKEVAEKTQELRQLRGEELQGLDLEELKHLEKLLEGGLSQVTKTKDERCMKEISTLKRKGAELMEENQLLKQQME 172 5677888999999889999*************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MARKKIQIKK IDNVAARQVT FSKRRKGLFK KAHELSTLCD AEIALLVFSA TGKLFEYSST 60 STWQVIERRN LESERFDRLD TIPSLELQLE SSTYAMLSKE VAEKTQELRQ LRGEELQGLD 120 LEELKHLEKL LEGGLSQVTK TKDERCMKEI STLKRKGAEL MEENQLLKQQ MENLPHVVEA 180 VVAHQGQSSE SIAHVQRSGD PPQGYNSSDV SLRLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-60 | MIKC_MADS family protein |