PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022761576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GRAS | ||||||||
Protein Properties | Length: 1626aa MW: 186837 Da PI: 6.1395 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 28.4 | 1.9e-09 | 7 | 65 | 3 | 60 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvsel 60 ++L+ cA+a+++g+l+la++lL+ + +las++ + ++++yf+eAL +r+ + +++ XP_022761576.1 7 KALVVCAQAIQDGNLKLADSLLELIWNLASEESdEQQSKVVKYFAEALVRRVCGLHPSV 65 789*************************9999856888**************9866655 PP | |||||||
2 | GRAS | 136.3 | 3.2e-42 | 80 | 342 | 98 | 374 |
GRAS 98 aNqaIleavegeervHiiDfdis..qGlQ.WpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe..fnvlvakrle 187 + a+ v +++r+H iDf+i +G Q W L+ aL+sR ++p s+R+ ++ +p +++ ++++ + rL + A+ +v++e +v++a++l XP_022761576.1 80 TGDAVNTVVTRKKRLHLIDFNIPhlYGWQpWEYLFGALNSRYADPLSVRVSVILPPFLKESVNIQQEKPRLLEWARDSKVELEddLKVVYANSLG 174 56799999**************62269888999**********************9999*********************9975578899***** PP GRAS 188 dleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280 +++ ++L++++ +Ea++V +++l+ ll + +++e L +++++P++v ++eq+a+ n+ +F +r+ ++++yys f + XP_022761576.1 175 EMDASMLDFRRseDEAVVVFYIFKLQMLLVDAGAMER----ELLKLRQINPEIVMIMEQDANNNDFNFIKRLEDSFQYYSHAFRFDGDS------ 259 *********9999****************99999999....55568*************************************766555...... PP GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 + +E+ +r+i+++v ceg++r+ rhetl++Wr+rl + GF pvpl+ + ++l++ ++ +++ee+g+ v++ + p++++SaW+ XP_022761576.1 260 -YQEMEND-YRRQIMSIVGCEGKDRIVRHETLGQWRSRLLTYGFLPVPLEAT-----SMLVSVYD----EIHEENGCWVFCEGNLPMFFISAWK 342 .5778888.79*************************************9754.....44555555....59**********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1626 aa Download sequence |
MGSSALKALV VCAQAIQDGN LKLADSLLEL IWNLASEESD EQQSKVVKYF AEALVRRVCG 60 LHPSVRYNLQ WLPYAFTCLT GDAVNTVVTR KKRLHLIDFN IPHLYGWQPW EYLFGALNSR 120 YADPLSVRVS VILPPFLKES VNIQQEKPRL LEWARDSKVE LEDDLKVVYA NSLGEMDASM 180 LDFRRSEDEA VVVFYIFKLQ MLLVDAGAME RELLKLRQIN PEIVMIMEQD ANNNDFNFIK 240 RLEDSFQYYS HAFRFDGDSY QEMENDYRRQ IMSIVGCEGK DRIVRHETLG QWRSRLLTYG 300 FLPVPLEATS MLVSVYDEIH EENGCWVFCE GNLPMFFISA WKVRQWEDHF NLISDNFVQG 360 FNPIPTSEDK IQPLQLLRES FSLNRLAAFA EIYDMLDDVC FKYKLTLALT WACGVNVKQN 420 LDGITSDPYK KDILCIESAY SYVNDEESQQ FMRRCAKQNH LLGGQAIVGK ALQSNEPFLF 480 ESSIAKPEKC DNQFAIVARE FGPHAALAIC LQNHCNDVYV VEFFLPLTEG KLEKPESMAL 540 DIFNDLKNMK KMFVTLRVHG TEVGFQEEAT SNIRQVTMSM QNLSPASSTN DFLNSNTTRP 600 LNTFEARDGH VELERQGFNE QGTMASCSNQ LGMATIGFSS VSIHASSVGG ICPFNAPKPV 660 GYDGVLETQG TWKQEIKKKN CVSQTISNGN NNIVKVNKVC TIPRTKQRKL VSDVWKDFIK 720 FEVDGKQWAK CNHCHKKFTG SSKSGTTHLK NHLERCPIKK SECQERQLKF PAETGDSTTQ 780 DTNERNSTFD QERSRLDLVK MIIKHQFPLD TAELEFFKNF VKNLQPMFEF QSQAIILSDI 840 HRIYEVEKEK LKQYLDQLAC NFSLTISMWK DNPRKIAYCC LIAHFIDDGW ELKAKIIAFK 900 ILEHSYDTGT LIGIIRSSIL EWNMSKKVCS ITVDNSSLKD DLVQQIKEAC LSDQGSLLSS 960 HCFISCSLIQ DGLHEIDDIV SKMRKSIEYI SETAHGKLKF QEAVNQVKLK VGKSRDDLPL 1020 RLDSDFGILD CALELREIFC QMEQIDGSFR VNPSMEEWDK AIALHSCLKG FYDILSSFEG 1080 IQSLTANLYF PKLCNIYKKF LQLEKSSYPF VSSMKRKFDN YWSLCNLVFT VAVVLDPRLK 1140 FKFVEFSYSE IYGRDSKMQL NKFHKVLMEV YHEYADEPRI LTTSASDFGD FGCSTGQSTQ 1200 IANDCILDSF SKFASAGNFN ELASWKSELD CYLDEPLLRL DETSFDILVS IVPPCSDLSA 1260 VITNPAYSSL NPESLEALAC SQNWLEMSKG SGRANHVPQQ NMAKRKMEEK ETHALKNFQR 1320 EGMAPLKSSE PNHGRNISGL IEIPNGGPSS DNESEFQCFS SESDGEVAWR EHGEWHEEDI 1380 RAYLISDFTE KESKRLKRWQ SHEMSGKLIG RDKEFGVLDY KLACLLIVPH GDETRTDYYI 1440 NDLVVNTFFK LLKKRSDRFP KAYINHFSFD SQIATYLIEG TRSKHEVLAW FKFDQKLTGV 1500 EKLFLPLCLS QHWILFYVDV KKQRFSWLDS IESSRMLHVV EKEAILGWFK RFLLPTLGYN 1560 NANKWPFELR YDIPVQENLV DCGLFVMKYA DCLTHGDVFP FTQQDMAHFR RRTFLDIYKG 1620 RLHCQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03450.1 | 8e-51 | GRAS family protein |