PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022761572.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRAS

Protein Properties

Length: 1348aa MW: 153930 Da PI: 6.261

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022761572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	152.3	4.5e-47	7	305	3	331
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 ++Ll+cA+a+++g+l+la++ L+ + +la+++ + +++++f+eAL +r ++ l+p+ ++ P++ + XP_022761572.1 7 QALLACAQAIQDGNLKLADSHLELILNLAAKESdEQQSKVVKFFAEALVRRAYG--------LHPTIPY-------------NLQCLPVY--CTY 78 89*******************998886665538899***********9........3333332.............13455654..445 PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe..fnvlvakrledl 189 + aI v +++r+H+iDf i QW +L+ +L++ ++pps+R+ ++ +p +++ +++e ++ + A+ ++v++e +v++a++l ++ XP_022761572.1 79 LIGDAIKTVVTKKKRLHVIDFKIPSLHQWRSLFGKLNNCYADPPSVRVSVILPPFLKRSVNIQEEKQYVLSCAKDCDVELEddLKVVYANSLGEV 173 6689*********************************************9999*******************85578899*** PP GRAS 190 eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282 + ++L++++ +Ea++V +++l+ ll++ +++e e Lk +++++P++v ++eq+a+ n+++F +r+ ++++yys + ++ XP_022761572.1 174 DASMLDFRRseDEAVVVLYSHKLQMLLADAGAMER---ESLK-LRQINPEIVMIIEQDANNNDSNFIKRLEDSFQYYSHALRVAPDSF------- 257 ***9999******************99...8887.6*******************************998775553....... PP GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplse 331 + +E+ +r+i+n++ ceg++r+ rhetl++Wr+rl + GF pvpl+ XP_022761572.1 258 QEMEND-YRRQIRNILGCEGKDRIVRHETLAQWRSRLLRYGFLPVPLEG 305 678888.79***********************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1348 aa Download sequence
MASSALQALL ACAQAIQDGN LKLADSHLEL ILNLAAKESD EQQSKVVKFF AEALVRRAYG 60 LHPTIPYNLQ CLPVYCTYLI GDAIKTVVTK KKRLHVIDFK IPSLHQWRSL FGKLNNCYAD 120 PPSVRVSVIL PPFLKRSVNI QEEKQYVLSC AKDCDVELED DLKVVYANSL GEVDASMLDF 180 RRSEDEAVVV LYSHKLQMLL ADAGAMERES LKLRQINPEI VMIIEQDANN NDSNFIKRLE 240 DSFQYYSHAL RVAPDSFQEM ENDYRRQIRN ILGCEGKDRI VRHETLAQWR SRLLRYGFLP 300 VPLEGEPSLL SPEFHEENGC WVSNKDYLPK FFVSAWKLTH WEDHFNLSSY NIGQGFNTFS 360 TLEDMVQPLQ PLHEVSSLNR LAVFVEIYDM LEDVCLKYKL SLALTWACGT NVKQNLDGTI 420 SYPYKKDILY IESTYSYANN LNSRWFMETY AKQNHLLEGQ AIVGKALQSN EPFLFESSIV 480 KPEKRDYQLP FVAREFGPHA ALAICLQNHY NDVYVVEFFL PLSKGKLEKP ESVALHIFND 540 LKNKKKMFVT LRVQGTEVGF QEEATSNIPQ VTMSMRSPPP ASSINDFLNS NITRPLNTFE 600 PRDGHVELQR QGFNEEGAMV SCSDQVGMAT IGFSSVSIHA SSLGGICPFN ASMPVGYDAV 660 LETQGPWKQE IREKNCISQI ISNGDNKILK VNKVSAIPRT KQRRSEVWKD FIKYEENGKQ 720 WAKCNHCKKE FTGSSKSGTT HLKNHLERCP VKKSEYQERQ LKFPAETGDS ATQDINERNS 780 TFDQERSRLD LVKMIIKHQF PLDMAELEFF KNFAKNLQPM FEFQSQAIIL SDIHHVHEEE 840 KEKLQQYLDQ IACNFSLTIR MWKDNPRKIA YCCLIAHFID DGWELKAKII AFKILEHSYD 900 TGTLIGIIRS SILEWNMSKK VCSITVDNSS LNDDLVQQIK EACLSDPGSL LSIHCFISCT 960 LIQDGLHEID DIVLKMRKSI EYISETAHAK LKFQEAVNQV KLQGGKSRDD LPLGLDSDFG 1020 ILESALELRE IFCQMEQIDG SFRVNPSMEE WDKAIALHSC LKVFYDILSS FEGIQSPTAN 1080 LYFPKLCNIY KKFLQLEKSS YPFVSLMKRK FDNYWSLCNL VFTVTVVLDP RLKFKFVEFS 1140 YREIYGPDSK MQLNKFHKVL MDVYHEYANE PRNLTTSASD FGDFGSSTGQ STPIANDCIL 1200 DSFGKFASAS NFNELASWKS ELDCYLDEPL LRLDETLFDI LGWWHVNSER FPTLGRMARD 1260 LLAMPVSIVP PCSDLSAVIT NPAYSSLNPE SLEALVCSQN WLEMPKGSGR ANHVPQQNMA 1320 KRKMEEKETH ALKNFQREGM APLKSSGC

Sequence ? help Back to Top

Protein Sequence Length: 1348 aa Download sequence

MASSALQALL ACAQAIQDGN LKLADSHLEL ILNLAAKESD EQQSKVVKFF AEALVRRAYG  60
LHPTIPYNLQ CLPVYCTYLI GDAIKTVVTK KKRLHVIDFK IPSLHQWRSL FGKLNNCYAD  120
PPSVRVSVIL PPFLKRSVNI QEEKQYVLSC AKDCDVELED DLKVVYANSL GEVDASMLDF  180
RRSEDEAVVV LYSHKLQMLL ADAGAMERES LKLRQINPEI VMIIEQDANN NDSNFIKRLE  240
DSFQYYSHAL RVAPDSFQEM ENDYRRQIRN ILGCEGKDRI VRHETLAQWR SRLLRYGFLP  300
VPLEGEPSLL SPEFHEENGC WVSNKDYLPK FFVSAWKLTH WEDHFNLSSY NIGQGFNTFS  360
TLEDMVQPLQ PLHEVSSLNR LAVFVEIYDM LEDVCLKYKL SLALTWACGT NVKQNLDGTI  420
SYPYKKDILY IESTYSYANN LNSRWFMETY AKQNHLLEGQ AIVGKALQSN EPFLFESSIV  480
KPEKRDYQLP FVAREFGPHA ALAICLQNHY NDVYVVEFFL PLSKGKLEKP ESVALHIFND  540
LKNKKKMFVT LRVQGTEVGF QEEATSNIPQ VTMSMRSPPP ASSINDFLNS NITRPLNTFE  600
PRDGHVELQR QGFNEEGAMV SCSDQVGMAT IGFSSVSIHA SSLGGICPFN ASMPVGYDAV  660
LETQGPWKQE IREKNCISQI ISNGDNKILK VNKVSAIPRT KQRRSEVWKD FIKYEENGKQ  720
WAKCNHCKKE FTGSSKSGTT HLKNHLERCP VKKSEYQERQ LKFPAETGDS ATQDINERNS  780
TFDQERSRLD LVKMIIKHQF PLDMAELEFF KNFAKNLQPM FEFQSQAIIL SDIHHVHEEE  840
KEKLQQYLDQ IACNFSLTIR MWKDNPRKIA YCCLIAHFID DGWELKAKII AFKILEHSYD  900
TGTLIGIIRS SILEWNMSKK VCSITVDNSS LNDDLVQQIK EACLSDPGSL LSIHCFISCT  960
LIQDGLHEID DIVLKMRKSI EYISETAHAK LKFQEAVNQV KLQGGKSRDD LPLGLDSDFG  1020
ILESALELRE IFCQMEQIDG SFRVNPSMEE WDKAIALHSC LKVFYDILSS FEGIQSPTAN  1080
LYFPKLCNIY KKFLQLEKSS YPFVSLMKRK FDNYWSLCNL VFTVTVVLDP RLKFKFVEFS  1140
YREIYGPDSK MQLNKFHKVL MDVYHEYANE PRNLTTSASD FGDFGSSTGQ STPIANDCIL  1200
DSFGKFASAS NFNELASWKS ELDCYLDEPL LRLDETLFDI LGWWHVNSER FPTLGRMARD  1260
LLAMPVSIVP PCSDLSAVIT NPAYSSLNPE SLEALVCSQN WLEMPKGSGR ANHVPQQNMA  1320
KRKMEEKETH ALKNFQREGM APLKSSGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01570.1	1e-43	GRAS family protein