PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022761269.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 601aa    MW: 68058.6 Da    PI: 5.0297
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022761269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS276.39.5e-852305993374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsevsPilkfs 94 
                      lLl++Ae + +++  +a++lL++   ++s++g+++qR++ yf eAL++++ r ++    k l+ ++  + +  + +    + + +   P+ +++
  XP_022761269.1 230 GLLLAAAEKIGHQQYDRASRLLKQCDYMSSKTGNTVQRVVYYFSEALREKIEReTGRPSPKGLRRKPLFNFDeaMMKPNPTTMACHGELPFSQIT 324
                     58***************************************************333334444433333321122222223334488889****** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++   qaI+e v++++r+HiiDf i +G+QW  L+qaLasR e p   l+iT+v+    + ++ +e tg+ L++fA+++g+pf ++++++ ++ d
  XP_022761269.1 325 QFSGIQAIVENVSEAKRIHIIDFAIRNGVQWTVLMQALASRHECPLeLLKITAVAT---NANDIIEGTGKWLSSFAQSVGLPFAYKIVMVPDMLD 416
                     ******************************************7665499*******...46999***********************9999**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ ++++++ +E++aV  +++  ++l+ +  le+    ++++++ ++P+++vvve ea+hns++F++rf+e l ++sa fd++++ + ++ ++r 
  XP_022761269.1 417 LKEDHFELDAEETIAVYAAFAFRSMLAMPNRLEN----IMRVLRVMNPRLMVVVEIEANHNSPTFVNRFIEVLFFFSAYFDCVATCMKQNCKNRE 507
                     *************************976666666....*************************************************9999**** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E ++++  i+n+va+eg+er+ rh ++  Wr+ + + G+++++ls +   qa+l+l++++ ++  +++ + ++l+ gWk+ p+ s+S+W+
  XP_022761269.1 508 IIESVFFADGIRNMVAAEGEERKVRHVKFDVWRAFFARYGMGEAELSMSSLYQADLVLNTFAcGNSCTLDMNGKCLLVGWKGTPMHSLSVWK 599
                     **************************************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    
MANAVFSLDD LNIHEVSDML SSSNKDFQSF ELCNRGKQSN FYREEYWGET GGIDSLSSDY  60
GSYRDDLLQE EGFSFSKYRP QEQQKQPFTM TDYGLLDGVS FNAASPPLQT CLEEIAKLGQ  120
MPSGIQNVAE TKEEKQYPFS LSSLGLLNNY GSGFKRLNGE RRIEEVDDIT VFTKKEDRKL  180
STEEVMRIAG EMFILSSCQT IDSISMLDHP SNLSFSGLSD QETRDVELAG LLLAAAEKIG  240
HQQYDRASRL LKQCDYMSSK TGNTVQRVVY YFSEALREKI ERETGRPSPK GLRRKPLFNF  300
DEAMMKPNPT TMACHGELPF SQITQFSGIQ AIVENVSEAK RIHIIDFAIR NGVQWTVLMQ  360
ALASRHECPL ELLKITAVAT NANDIIEGTG KWLSSFAQSV GLPFAYKIVM VPDMLDLKED  420
HFELDAEETI AVYAAFAFRS MLAMPNRLEN IMRVLRVMNP RLMVVVEIEA NHNSPTFVNR  480
FIEVLFFFSA YFDCVATCMK QNCKNREIIE SVFFADGIRN MVAAEGEERK VRHVKFDVWR  540
AFFARYGMGE AELSMSSLYQ ADLVLNTFAC GNSCTLDMNG KCLLVGWKGT PMHSLSVWKF  600
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.14e-55GRAS family protein