PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760465.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 767aa MW: 86448.9 Da PI: 6.6412

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	116.8	1.1e-36	138	213	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv++C+ad+se+k yhrrh+vC ++++++vl++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k XP_022760465.1 138 RCQVPSCKADISELKGYHRRHRVCLRCANSTTVLIDGESKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRK 213 6************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence
MEQDPSPRTQ TPRGTHRSKD PEMDVHFPVT EADPSSSVWD WDDLLDFTVD EHFSISFDDE 60 NSSHSPLETT GTDPDPVPGP GRVRKRDPRM ICSNFLAGQV PCACPEIDAQ IEKLEEEEAG 120 VPGKKRARTG RCGPGTCRCQ VPSCKADISE LKGYHRRHRV CLRCANSTTV LIDGESKRYC 180 QQCGKFHLLS DFDEGKRSCR RKLERHNNRR RRKPVGSKTA VNKEGLQSED IARDGEAGKD 240 DLSFSGQIAE EEPAFESEDV HVSTYCSAPM LQSVNNDSVV TLNETETDGA KDDSKVSIST 300 SYCDNKTAYS SMCPTGRISF KLYDWNPAEF PRRLRHQLSE NPMTHMHNFV FTPGRMLYGR 360 GFMTIYLNNM IFRTRKDGTS MVKVDVEVQA PRLHYVHPAC FEAGKPMEFV ACGTNLLQPK 420 FRFLVSFAGR YLPNDYCVAS THVQSKEDSP SCDHRLYKIY VPQTEPDLFG PAFIEVENQS 480 GLSNFIPVLI GDKEVCSEMK SLQKRFDASL FQGGSKISAT GSLLELCEAS TSRQSAYSDF 540 VLDIAWLLRE PKLENLQEIM TSSQIQRFNC LLSFLIQNES TVILKKVLQN LKTVVQKAGF 600 TGTNDSGIRL LKKYMDYARD ILSNKLQKGE SPVLLSEYIE RERNWYSQRS FKNDELAVVP 660 NVSQDSEERT SGKLPTLMAS TTLARSETVW LLNKEIIMNV NLSKDFRRES CSPIFATTTL 720 GYRPTVFVIA TAAICLGMCA VFFHPNTVGE FAVTIRRCLL ERVLDVD

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence

MEQDPSPRTQ TPRGTHRSKD PEMDVHFPVT EADPSSSVWD WDDLLDFTVD EHFSISFDDE  60
NSSHSPLETT GTDPDPVPGP GRVRKRDPRM ICSNFLAGQV PCACPEIDAQ IEKLEEEEAG  120
VPGKKRARTG RCGPGTCRCQ VPSCKADISE LKGYHRRHRV CLRCANSTTV LIDGESKRYC  180
QQCGKFHLLS DFDEGKRSCR RKLERHNNRR RRKPVGSKTA VNKEGLQSED IARDGEAGKD  240
DLSFSGQIAE EEPAFESEDV HVSTYCSAPM LQSVNNDSVV TLNETETDGA KDDSKVSIST  300
SYCDNKTAYS SMCPTGRISF KLYDWNPAEF PRRLRHQLSE NPMTHMHNFV FTPGRMLYGR  360
GFMTIYLNNM IFRTRKDGTS MVKVDVEVQA PRLHYVHPAC FEAGKPMEFV ACGTNLLQPK  420
FRFLVSFAGR YLPNDYCVAS THVQSKEDSP SCDHRLYKIY VPQTEPDLFG PAFIEVENQS  480
GLSNFIPVLI GDKEVCSEMK SLQKRFDASL FQGGSKISAT GSLLELCEAS TSRQSAYSDF  540
VLDIAWLLRE PKLENLQEIM TSSQIQRFNC LLSFLIQNES TVILKKVLQN LKTVVQKAGF  600
TGTNDSGIRL LKKYMDYARD ILSNKLQKGE SPVLLSEYIE RERNWYSQRS FKNDELAVVP  660
NVSQDSEERT SGKLPTLMAS TTLARSETVW LLNKEIIMNV NLSKDFRRES CSPIFATTTL  720
GYRPTVFVIA TAAICLGMCA VFFHPNTVGE FAVTIRRCLL ERVLDVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	212	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein