PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022760230.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 246aa MW: 28701.8 Da PI: 10.1739

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022760230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.5	5e-08	85	130	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er RRd+ +++++ L ++lP +K++K +i++ A + +++Lq XP_022760230.1 85 HMMNERMRRDKQKKSYFALHSMLPLG-----TKNDKNSIVQTASKRVQELQ 130 889*********************97.....79999999999998888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MDQLIEQLLQ GEIFWYETTH APPVSPSAFV PYPNRPRIGM GLQTADCNNG VNSGNMNKRM 60 IEFLRQSWPT TTGIKDTEKE RCFRHMMNER MRRDKQKKSY FALHSMLPLG TKNDKNSIVQ 120 TASKRVQELQ WLKKDLERRN YELRANFAAV NENQNNEGTK ISVRIDNPKV SGIDSILEVL 180 KCLKTLDSKP RMIQSKFTNQ EFFAVMDIEN EMRAAQVEKV VNRALQEAGR KLQDTPKENQ 240 TWHQRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	98	MRRDKQKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	3e-44	bHLH family protein