PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759931.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 366aa MW: 41637.5 Da PI: 9.7544

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.6	1.9e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW + Ed ll+ +vkq+G++ W++I+++mg ++R +k+c +rw +yl XP_022759931.1 4 RQRWQPGEDALLKAYVKQYGPKEWNLISQRMGkpLNRDPKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	31.7	3.4e-10	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T eE+ l + + +++G++ Wk+Ia +++ gRt+k + +w + XP_022759931.1 59 KGSLTLEEQSLVISLQAKYGNK-WKKIAGEVP-GRTPKRLGKWWEVF 103 57789***************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MKERQRWQPG EDALLKAYVK QYGPKEWNLI SQRMGKPLNR DPKSCLERWK NYLKPGIKKG 60 SLTLEEQSLV ISLQAKYGNK WKKIAGEVPG RTPKRLGKWW EVFKEKQLKQ LQKNQGRIEF 120 SPEGTSSTIT PPASSSPGQY DHILETFAEK YVQPNNNFFA NYSTINLSPI MPPTISLPDP 180 DPVLSLGSGS SGTARTSSSV VLPLWMNHNH PSSLSSSTSS TTPSPSVSLS LSPGEAGLDP 240 DLIRFMPGQV STMVQYCKEL EEGRQSWMQH KKEATWRLSR LEQQLESEKA RKRREKMEEI 300 ESKIRSLREE EMAFLGRIES ECKEQWNVLQ RDAETKETKL MEAWCSKHVK LAKLMEQIGC 360 SAQSPP

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MKERQRWQPG EDALLKAYVK QYGPKEWNLI SQRMGKPLNR DPKSCLERWK NYLKPGIKKG  60
SLTLEEQSLV ISLQAKYGNK WKKIAGEVPG RTPKRLGKWW EVFKEKQLKQ LQKNQGRIEF  120
SPEGTSSTIT PPASSSPGQY DHILETFAEK YVQPNNNFFA NYSTINLSPI MPPTISLPDP  180
DPVLSLGSGS SGTARTSSSV VLPLWMNHNH PSSLSSSTSS TTPSPSVSLS LSPGEAGLDP  240
DLIRFMPGQV STMVQYCKEL EEGRQSWMQH KKEATWRLSR LEQQLESEKA RKRREKMEEI  300
ESKIRSLREE EMAFLGRIES ECKEQWNVLQ RDAETKETKL MEAWCSKHVK LAKLMEQIGC  360
SAQSPP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	296	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-59	MYB family protein