PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022759481.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21394 Da PI: 9.3423 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.3 | 6.1e-21 | 97 | 147 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp++ng r +lg++ t+e+Aa a+++a+ k++g XP_022759481.1 97 HYRGVRRRP-WGKYAAEIRDPKKNG--SRLWLGTYETPEDAALAYDQAAFKMRG 147 7********.***********9998..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MMGDINPWDS DFDLLESISS HLLEDNFEAS MGFTTAFQGN NIAPPPVYLR SSSSSFSSEP 60 LGLTNGAKPE PSVDDVLMEE TNVEGPQLPN ALPKMEHYRG VRRRPWGKYA AEIRDPKKNG 120 SRLWLGTYET PEDAALAYDQ AAFKMRGSKA KLNFPHLIGS GNLKEPIRVK PKRRSPEPST 180 SSFNNGSPKR RR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 172 | 192 | KRRSPEPSTSSFNNGSPKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 4e-47 | ERF family protein |