PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759268.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRAS

Protein Properties

Length: 1450aa MW: 164904 Da PI: 5.5897

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	75.9	7.3e-24	119	319	116	331
GRAS 116 DfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl.eleeLrvkpgEalaVnlvlq 209 D d+ ++ + L+qa+ p s+R+ +++sp +++ + +g++L+ A+ ++v++ef+v+ a++l dl e e+r ++Ea++++ ++ XP_022759268.1 119 DVDARYCDLFSVLMQAIL-----PRSFRLSVIVSPLLKNAIDVGGVGRNLTCRAKLVNVTLEFQVFKANSLGDLdESFEFRRAEDEAVVISYRYK 208 333333333333333333.....679********99************************9999993345666666********* PP GRAS 210 lhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae 304 lhrll+es+s+e L +++++P+ v++veq a+ n+ +F er+ +++e ys +f ++++ s + + r + i++ v ceg XP_022759268.1 209 LHRLLAESGSMER----ELLRLRQIKPDNVIIVEQSASDNDFNFIERLERSFESYSCIFGKISNS----SCDLLDYHR----QGICSSVGCEGMV 291 *********....56678*********************************999887....455555554....59******* PP GRAS 305 rrerhetlek.WrerleeaGFkpvplse 331 het+++ W +rl++aGF pl++ XP_022759268.1 292 VMDPHETVAQfWGSRLQRAGFLLFPLQK 319 999998777**********9998865 PP

Sequence ? help Back to Top
Protein Sequence Length: 1450 aa Download sequence
MGSWVLQVSK ACAQAFQDGN LILADHYMAC IWDLAVMETD ENKSKLIKYF AEALVRRAYG 60 LRPTIPYPTS FMPGSNFYRT LQLVTGTATR GKRQVHIIDF LSMLQPDIGT CYGDWLLPDV 120 DARYCDLFSV LMQAILPRSF RLSVIVSPLL KNAIDVGGVG RNLTCRAKLV NVTLEFQVFK 180 ANSLGDLDES FEFRRAEDEA VVISYRYKLH RLLAESGSME RELLRLRQIK PDNVIIVEQS 240 ASDNDFNFIE RLERSFESYS CIFGKISNSS CDLLDYHRQG ICSSVGCEGM VVMDPHETVA 300 QFWGSRLQRA GFLLFPLQKP GLFGLHVQEE NGCLIVNLEE SPPVVISVWK FTKSMDNFSS 360 NSVQDSHQNF ADEGLFPTVE VFPEGFSLNR IAALAEIYDL SEDICLRYEL PLALTWTLWA 420 NVKHVQNEIT PDLQKKHTFS IQSTACYVNN NCASKEFMEI CVRQPHLFLE GQAIAGKVLQ 480 LNESLFVSDI RKFDMLEYPF ANAASKFGYR DVVAINLLNN FVGGDSCVLE FYLPSSTKNF 540 EEQKLLEDRI FFYLKNVKKT FVTPRVHGTG LGFGEATISN IPQMTMPVRS SPPAPTIGNL 600 VGTGVSLLQE DSIGVGLPQE AISNTPVVTQ VAMPMASSPP APATGPLLVG GTDFLQEAIL 660 STPVVTQVLM PTRSTPPAST ISHSFNLNVN GLLNTAEPRD DREVGTQQPH EQGVKKKDNI 720 FEPIPDIDPE NVKANRDISI LPRTKQRKSM VWEHFDRVWE NGSLWAKCKH CNKSCTGSSK 780 SGTTHLKNHL DRCPVKKSEY QDMQLKFPAQ STDLTILSAK EGSPIFDPER SRLDFEKLII 840 KLPYVLDMAE DESFKNFLNN LQPRFEIQPR ESILSNIYGI YEEEKEKLRH YFDQLACNIS 900 LTIRLLKDNL RKNVYCCLIA NFVDDDWELK KKILAFKILD YIYDAKSLST IIQESVSEWN 960 IRKKVCSIVL DDFPLNDNIV EHLKENCLSG QISLPSDSCY INCTLIQDGL YEIDDVLQNI 1020 RKSVEYVNET PFGRLKFQDA VNQVKLQGGK LRDDSPLRLD SNFDMLDWAL ESREVFCQLE 1080 QNDGNFRTNP SMKEWDRALV MHRFLKGFYD TLSSSGGAQS LTPNLYFPKL CDMYKKLLQL 1140 EKGNYPCMKL MKMKFEKYWN TYNLIFAIAA VLDPRLKFRF VEFSFGEIYQ CDSKMQLSKF 1200 YKLLMDVYYE YANEGSNLSR PASIFSDFSC STTQSANDSM LKSFSRYASA SNFNDVASWK 1260 SDIDCYLEEP LLPLVADGEL FDVLGWWRIN KLKFPTLGRM ARDILAIPVS VVPLDSSFNT 1320 LVTNLNYSGL GPNFVEAFIC CQDWLVTPKR NGKTEHVNVQ ITAKRKMEEK GSYVIENHKH 1380 SKYNAEETNN QATDKASYKM LDEETTCHEE INMTEHRTLS EKDIQAYLVS PFTQDEAKQI 1440 KRWESSRLSG

Sequence ? help Back to Top

Protein Sequence Length: 1450 aa Download sequence

MGSWVLQVSK ACAQAFQDGN LILADHYMAC IWDLAVMETD ENKSKLIKYF AEALVRRAYG  60
LRPTIPYPTS FMPGSNFYRT LQLVTGTATR GKRQVHIIDF LSMLQPDIGT CYGDWLLPDV  120
DARYCDLFSV LMQAILPRSF RLSVIVSPLL KNAIDVGGVG RNLTCRAKLV NVTLEFQVFK  180
ANSLGDLDES FEFRRAEDEA VVISYRYKLH RLLAESGSME RELLRLRQIK PDNVIIVEQS  240
ASDNDFNFIE RLERSFESYS CIFGKISNSS CDLLDYHRQG ICSSVGCEGM VVMDPHETVA  300
QFWGSRLQRA GFLLFPLQKP GLFGLHVQEE NGCLIVNLEE SPPVVISVWK FTKSMDNFSS  360
NSVQDSHQNF ADEGLFPTVE VFPEGFSLNR IAALAEIYDL SEDICLRYEL PLALTWTLWA  420
NVKHVQNEIT PDLQKKHTFS IQSTACYVNN NCASKEFMEI CVRQPHLFLE GQAIAGKVLQ  480
LNESLFVSDI RKFDMLEYPF ANAASKFGYR DVVAINLLNN FVGGDSCVLE FYLPSSTKNF  540
EEQKLLEDRI FFYLKNVKKT FVTPRVHGTG LGFGEATISN IPQMTMPVRS SPPAPTIGNL  600
VGTGVSLLQE DSIGVGLPQE AISNTPVVTQ VAMPMASSPP APATGPLLVG GTDFLQEAIL  660
STPVVTQVLM PTRSTPPAST ISHSFNLNVN GLLNTAEPRD DREVGTQQPH EQGVKKKDNI  720
FEPIPDIDPE NVKANRDISI LPRTKQRKSM VWEHFDRVWE NGSLWAKCKH CNKSCTGSSK  780
SGTTHLKNHL DRCPVKKSEY QDMQLKFPAQ STDLTILSAK EGSPIFDPER SRLDFEKLII  840
KLPYVLDMAE DESFKNFLNN LQPRFEIQPR ESILSNIYGI YEEEKEKLRH YFDQLACNIS  900
LTIRLLKDNL RKNVYCCLIA NFVDDDWELK KKILAFKILD YIYDAKSLST IIQESVSEWN  960
IRKKVCSIVL DDFPLNDNIV EHLKENCLSG QISLPSDSCY INCTLIQDGL YEIDDVLQNI  1020
RKSVEYVNET PFGRLKFQDA VNQVKLQGGK LRDDSPLRLD SNFDMLDWAL ESREVFCQLE  1080
QNDGNFRTNP SMKEWDRALV MHRFLKGFYD TLSSSGGAQS LTPNLYFPKL CDMYKKLLQL  1140
EKGNYPCMKL MKMKFEKYWN TYNLIFAIAA VLDPRLKFRF VEFSFGEIYQ CDSKMQLSKF  1200
YKLLMDVYYE YANEGSNLSR PASIFSDFSC STTQSANDSM LKSFSRYASA SNFNDVASWK  1260
SDIDCYLEEP LLPLVADGEL FDVLGWWRIN KLKFPTLGRM ARDILAIPVS VVPLDSSFNT  1320
LVTNLNYSGL GPNFVEAFIC CQDWLVTPKR NGKTEHVNVQ ITAKRKMEEK GSYVIENHKH  1380
SKYNAEETNN QATDKASYKM LDEETTCHEE INMTEHRTLS EKDIQAYLVS PFTQDEAKQI  1440
KRWESSRLSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01570.1	2e-40	GRAS family protein