PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022759174.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 29317.2 Da PI: 4.7392 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 58 | 1.7e-18 | 42 | 91 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f++Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_022759174.1 42 RSKHSETEQRRRSKINERFQTLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 91 899*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MVKSVATAQL HQEEEDDDDY EDKGETLKVE GKGSDQKTTA NRSKHSETEQ RRRSKINERF 60 QTLRDLIPQN DQKRDKASFL LEVIEYIQFL QEKLQMYEGS YQAWSQEPTK LIPWRNNHGL 120 AESFIDHSQV MKNGSSCEDD VVIPSMLANM QNSIETDLGN AAVFKALDHP PVSATSMINM 180 QTQSNTFANH GSGSGSMNMV YQPQFQSWQS RECLTESAVP NNSANERDDL TTRVESVGFS 240 SAYSQGTMNH DTYCSCLQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G38860.1 | 2e-51 | bHLH family protein |