PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022759171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28167 Da PI: 10.207 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.7 | 8.3e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss XP_022759171.1 10 RIENKISRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSNRGKLFEYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 94.6 | 1.6e-31 | 75 | 174 | 1 | 100 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y++++ s++++ +++++ e kLk+ ie+Lqr++R++lGe+L++Lsl++Lq Leqq+++slk+iR++Kn+l+ e+i+elqkkek lq++n +L XP_022759171.1 75 YAERQLISNDSESQANWSLECPKLKSTIESLQRNLRQFLGEELDPLSLRDLQLLEQQIHNSLKRIRTRKNKLMNESISELQKKEKTLQDQNSKLA 169 56778888889999********************************************************************************* PP K-box 96 kklee 100 kkl+e XP_022759171.1 170 KKLKE 174 **986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGRVQLRR IENKISRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFSN RGKLFEYSSD 60 SSIERILERH EQHSYAERQL ISNDSESQAN WSLECPKLKS TIESLQRNLR QFLGEELDPL 120 SLRDLQLLEQ QIHNSLKRIR TRKNKLMNES ISELQKKEKT LQDQNSKLAK KLKENEKIPT 180 EHAQCEQQNL AQNSPPQPAA TIQFPSLTIG GTFQAIEGTN KGAETQPQPS TNTVIPPWML 240 RHVHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26310.1 | 1e-78 | MIKC_MADS family protein |