PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022758733.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 26074.5 Da PI: 10.7026 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.9 | 9.2e-12 | 108 | 149 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ eeAa+++++a+ XP_022758733.1 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 149 79**98..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MVSIRRRKLL GLCSGKSSFL TPLPRFFDNG NAPENSSQNV RSVSVHPMPS EINHLHGKNI 60 AKVGSGSPNV SGSGSSKEQH NQPFPGQPIK RRKQHRRKHV QNQEPCLMRG VYFKNMKWQA 120 AIKVDKKQIH LGTVGSQEEA ARLYDRAAFM CGREPNFELA EEEKQELRKF KWDEFLAYTR 180 RSITNKKFKR RLGVGPQKRS EPAIENSDLD SKQGVNNFSA SEEVGPDSSA S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 1e-49 | ERF family protein |