PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757164.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 351aa MW: 36965.1 Da PI: 10.2552

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.1	2.7e-37	68	165	1	99
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksa 94 aa+k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ + + + ++++ ++ + XP_022757164.1 68 AAPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsV--NGTLKIPTTTNANPEPGD 160 689**************************************************************8888854421..111111111112222222 PP TCP 95 akskk 99 +++kk XP_022757164.1 161 PSKKK 165 22222 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MAANHKQKVE EDGDARAVDL SINGGGDEAT ASKNPKEEPD TKTAIGVMPM AVHVASAIPM 60 PVVTAPPAAP KRASTKDRHT KVEGRGRRIR MPATCAARIF QLTRELGHKS DGETIRWLLE 120 HAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNANPEPGD PSKKKRRRPA NSEYVDINDT 180 VSVSSGLAPV ITSQQLQQQQ RQAVLPQGLV PVWAIPSNSV VPGAFFVVPP MASMAGPSTH 240 PHIFTFPATA TPLINISAGP ISSFVSAMQH GVNIAAATPG QLQSNIAVTS STLPVSKTVK 300 TTSVMAPSSS SAASITSNSA TTTTTTQMLR DFSLEIYDKQ ELQFMTRSSK H

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MAANHKQKVE EDGDARAVDL SINGGGDEAT ASKNPKEEPD TKTAIGVMPM AVHVASAIPM  60
PVVTAPPAAP KRASTKDRHT KVEGRGRRIR MPATCAARIF QLTRELGHKS DGETIRWLLE  120
HAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNANPEPGD PSKKKRRRPA NSEYVDINDT  180
VSVSSGLAPV ITSQQLQQQQ RQAVLPQGLV PVWAIPSNSV VPGAFFVVPP MASMAGPSTH  240
PHIFTFPATA TPLINISAGP ISSFVSAMQH GVNIAAATPG QLQSNIAVTS STLPVSKTVK  300
TTSVMAPSSS SAASITSNSA TTTTTTQMLR DFSLEIYDKQ ELQFMTRSSK H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	168	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	5e-83	TCP family protein