PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022757141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 25048.8 Da PI: 10.1039 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.4 | 2.5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022757141.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSTRGKLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 84.5 | 2.2e-28 | 78 | 169 | 7 | 98 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ +e++ ++l++e++++ k+ie L+ + R+llGe+L+s++l+eLqq+eqqLe+s+++iR++K+++++eqie+l++kek l en +L +k+ XP_022757141.1 78 TKPTEQNLQHLKTEAENMMKKIELLEVSRRKLLGEGLGSCTLEELQQIEQQLERSVSSIRARKTQVFKEQIERLKEKEKVLAAENAKLCEKY 169 347899**********************************************************************************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFST RGKLYEFASS 60 SMKDTIERYM RHMKDNRTKP TEQNLQHLKT EAENMMKKIE LLEVSRRKLL GEGLGSCTLE 120 ELQQIEQQLE RSVSSIRARK TQVFKEQIER LKEKEKVLAA ENAKLCEKYG MKQWKRSNEQ 180 KENVPYDESS PSSDVETELF IGPPEGRTKR FLQPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-89 | MIKC_MADS family protein |