PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756941.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 299aa MW: 33148.2 Da PI: 8.767

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756941.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.2	2.9e-18	129	183	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_022756941.1 129 RKKLRLSKEQSLVLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 183 788899***********************************************98 PP
2	HD-ZIP_I/II	125.9	1.7e-40	129	218	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ +LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_022756941.1 129 RKKLRLSKEQSLVLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-AL 218 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MADKDDGLGL SLSLGCAQNQ SSLKLNLMPL ASPRMQNHQQ KNTWNELFQS SGRHLDTRSF 60 LRGIDVNRAP ATADCEEEGG VSSPNSTISS ISGKRNERDP VGDETEAERE SCSRASDDED 120 GGAAGDASRK KLRLSKEQSL VLEETFKEHS TLNPKQKLAL AKQLNLRPRQ VEVWFQNRRA 180 RTKLKQTEVD CEYLKRCCEN LTEENRRLQK EVQELRALKL SPQLYMHMNP PTTLTMCPSC 240 ERVAVSSSSS SAAAASSTPT STVPNRRQMS PSHQRPAPVS PWAAMPISLR PFNAPASRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	134	SRKKLRL
2	178	186	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	2e-82	HD-ZIP family protein