PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756545.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 617aa MW: 67451.4 Da PI: 7.4935

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.6	8.7e-15	251	310	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022756545.1 251 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 310 57*****************666664477446***********************98 PP
2	AP2	46.9	6.8e-15	353	404	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022756545.1 353 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 404 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MRLLFLSLAT SISVSSSASL SSFHFLSHGF IDSLFLLLLL VVPLFPKTKN NSYLLLISLS 60 SFEIFVRQGD TMDMNMGSMD SSSSTQNWLA FSLSNHRQQQ HLNLPSSTSH LCLFEAFTTS 120 TTIATPATTN SSAAEEDAGA GAGTTVGATD LSMFNGGPKL EDFLGGSSTT TGAGAAPQQQ 180 LPHHHFATET PVTVSDTEIY DSELKTIAAS FLRGFSSEQT DTRKQRQQKQ QVPASEPAPR 240 RALDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQS RKGRQVYLGG YDKEEKAARA 300 YDLAALKYWG ATTTTNFPIS TYEKELEEMK NMTRQEFVAS LRRKSSGFSR GASIYRGVTR 360 HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN FDMSRYDVKS 420 IVNSNLPIGG LGNKTKNCSD SASDSKSTDD DRDHSSASSA VTFAAQPAPS STLSFAVPIK 480 QDPSDYWSSI FGYNNSTASL SSAKNPSLFH QPSNNGSGFQ SPTDFNMDFG GNSTVNESIN 540 NGLFNVGGYV QQQQQQQQQT STSSLPFATP IVLNNSVNNN YEGSSGYGSW NIAQSLQSYQ 600 TAKPSLSVFQ TPIFGME

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MRLLFLSLAT SISVSSSASL SSFHFLSHGF IDSLFLLLLL VVPLFPKTKN NSYLLLISLS  60
SFEIFVRQGD TMDMNMGSMD SSSSTQNWLA FSLSNHRQQQ HLNLPSSTSH LCLFEAFTTS  120
TTIATPATTN SSAAEEDAGA GAGTTVGATD LSMFNGGPKL EDFLGGSSTT TGAGAAPQQQ  180
LPHHHFATET PVTVSDTEIY DSELKTIAAS FLRGFSSEQT DTRKQRQQKQ QVPASEPAPR  240
RALDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQS RKGRQVYLGG YDKEEKAARA  300
YDLAALKYWG ATTTTNFPIS TYEKELEEMK NMTRQEFVAS LRRKSSGFSR GASIYRGVTR  360
HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN FDMSRYDVKS  420
IVNSNLPIGG LGNKTKNCSD SASDSKSTDD DRDHSSASSA VTFAAQPAPS STLSFAVPIK  480
QDPSDYWSSI FGYNNSTASL SSAKNPSLFH QPSNNGSGFQ SPTDFNMDFG GNSTVNESIN  540
NGLFNVGGYV QQQQQQQQQT STSSLPFATP IVLNNSVNNN YEGSSGYGSW NIAQSLQSYQ  600
TAKPSLSVFQ TPIFGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-151	AP2 family protein