PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022756482.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 21481.5 Da PI: 9.9933 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ rg+Wv+eIr+p +r +lg+f taeeAa+a+++a+ + g XP_022756482.1 5 KKFRGVRQRH-RGSWVSEIRHP-----LlkRRLWLGTFKTAEEAARAYDQAAILMSG 55 59*******9.8*********8.....334*********************987765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 193 aa Download sequence |
MVQSKKFRGV RQRHRGSWVS EIRHPLLKRR LWLGTFKTAE EAARAYDQAA ILMSGRNAKT 60 NFPISQIPSG DPKGTENSLS TPPNELSELL HAKLRKCSKA PSPSMTCLRL DIENSHIGVW 120 QKQAGQSSDS NWVMTVQLGK GNAEVSANTL PSNKTPVLAG PELRREMDEE RIALQMIEEL 180 LHGVQDGEGN LFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-60 | ERF family protein |