PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756466.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 539aa    MW: 59046.7 Da    PI: 5.911
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS418.55.6e-1281625261373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+ L++cAe+v+ gdl+la++l+  ++ l  + ++   + ++a +f  AL++r+++   ++   +    +      e+   ++ f+e++P+lkf
  XP_022756466.1 162 LVHMLMTCAECVQRGDLSLATSLIDDMQGLltRVNTVCGIGKVAGHFIDALSRRIFQ---GIGGVFINGGS----GYENEILYHHFYEACPYLKF 249
                     689*************************99434444469*****************9...44433333333....5677778899********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea++g+++vH++Df++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++v+f f+ ++a+rled
  XP_022756466.1 250 AHFTANQAILEALDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPVLRLTGIGPPSPDGRDSLREIGFRLAELARSVNVHFAFRGVAASRLED 344
                     *********************************************************************************************** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L+v+p+Ea+aVn+++qlhrll ++ + +s+++++L+ ++sl+Pk+++vveqea+hn++ Fl+rf+eal+yys++fdslea    + ++++
  XP_022756466.1 345 FKPWMLQVNPKEAVAVNSIMQLHRLLGSDSTGNSTIETFLSWIRSLNPKIMTVVEQEANHNQPGFLDRFTEALHYYSTMFDSLEAC---TVQTEK 436
                     ***********************************************************************************999...689999 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      + + +++rei+nvv+ceg++r+erhe l+kWr+rl+ aG++p++l+++a kqa++ll  ++ +gy+vee++g+l+lgW+++pL+++SaW
  XP_022756466.1 437 ALAEIYIQREITNVVSCEGSARVERHEPLAKWRARLSGAGLRPLHLGSSAFKQASMLLTLFSAEGYSVEENEGCLTLGWHSHPLIAASAW 526
                     99999************************************************************************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MVLHDSAMST GSNSGSSSSS SSKPRLPPQQ QDIDGLLPGA GYKVRSSELR KVAQQLERLE  60
TATVNSLADS SQLSSDATHS YYNPSDITSW VDSLLSEFAQ PPTCPSEFIM DPVTNKTAIK  120
NAWTSNEHHM PQVHQNISYE QQSLNHQLTV VTAMEEDSGI MLVHMLMTCA ECVQRGDLSL  180
ATSLIDDMQG LLTRVNTVCG IGKVAGHFID ALSRRIFQGI GGVFINGGSG YENEILYHHF  240
YEACPYLKFA HFTANQAILE ALDGHDCVHV VDFNLMHGLQ WPALIQALAL RPGGPPVLRL  300
TGIGPPSPDG RDSLREIGFR LAELARSVNV HFAFRGVAAS RLEDFKPWML QVNPKEAVAV  360
NSIMQLHRLL GSDSTGNSTI ETFLSWIRSL NPKIMTVVEQ EANHNQPGFL DRFTEALHYY  420
STMFDSLEAC TVQTEKALAE IYIQREITNV VSCEGSARVE RHEPLAKWRA RLSGAGLRPL  480
HLGSSAFKQA SMLLTLFSAE GYSVEENEGC LTLGWHSHPL IAASAWHALP DAAGDVPGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-154GRAS family protein