PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756445.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 375aa    MW: 41479.3 Da    PI: 6.8193
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.78.5e-08137157526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G C+ Gd C FaHg
  XP_022756445.1 137 ACPDFRK-GNCRKGDACEFAHG 157
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MMLGETHRPN PTIHVPPWPN LEDDQTAEVY SLLNYNAADN HFSNNSNPFF LQEALTALQC  60
YLPSNEPDVE SDSELSGLDN PDSPVDAYSC DHFRMFEFKV RRCARGRSHD WTECPYAHPG  120
EKARRRDPRK YHYSGTACPD FRKGNCRKGD ACEFAHGVFE CWLHPARYRT QPCKDGPDCR  180
RRVCFFAHTP DQLRVVNSVD SYDGAPCAKA LTLWSSSGSG SPPVSPRADS SPPVSPMAQS  240
LSRSLGSASI NKMVASLRNL QLGKVKSLPS SWNTQVGGGS PSTPSGFGSP RGAVIRPGFC  300
SLPSTPTRNL TRPGIGYLDF LDQGCEEEPL MERVESGRDL RAKMFEKLSK ENSLEVNPGQ  360
FSGGLDVDWI TDLVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-136C3H family protein