PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756376.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 329aa MW: 37293.6 Da PI: 5.1438

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.1	2.6e-15	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+ Ede+l ++k +G g W++ +++ g++R++k+c++rw++yl XP_022756376.1 36 RGTWTALEDEILTAYIKAHGQGKWRSLPNRAGLKRCGKSCRLRWLNYL 83 89********************************************97 PP
2	Myb_DNA-binding	50.5	4.8e-16	89	133	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++++lG++ W++Ia +++ gRt++++k++w++ XP_022756376.1 89 RGNISHDEEELIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 133 78999***************.*****.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MVLFSLHFTV LEIEGDSEKE RRMGRSPCCS KEGLNRGTWT ALEDEILTAY IKAHGQGKWR 60 SLPNRAGLKR CGKSCRLRWL NYLRPDIKRG NISHDEEELI IRLHNLLGNR WSLIAGRLPG 120 RTDNEIKNYW NTTLGKRAKA QASSPASTET PPSKSTHKEL TTESQIDEPS NSPQSTESKI 180 QGIRTKATRC SSKVLVPLLP AATQDIDINN LTLQDPSELQ DYQPYYLTNH QEMDNKTTFQ 240 THHGTEVLDA FYSCGPDFLN FEINDQMQTI NGESEENNDI NKNLSEDPVQ PLPFDDAMFK 300 DWTKSPCLND NATIDLGSLA FLLDPDEWP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16720.1	5e-62	MYB family protein