PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022756334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 445aa MW: 47103.2 Da PI: 6.923 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37 | 6.1e-12 | 260 | 305 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022756334.1 260 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 305 99***********************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
MQPCSREMQA INSLLNPTQQ IPLHDLQSNG NSNSHQQIQN PHFDPTSSHD DFLEQMLSTL 60 PSCSLSDLKS PWNPTKSDET CPPNPDNNVG FHYDEILATK LRQHQINGGG GSSPATAAMK 120 MMMQQQMMLE GRATAFGRGV GGGLTMPLSL GSGAAGSHHN DIVDGSSFKS PNNQDHGGEG 180 SVQALYNGFG GGSLHGTNQS SNRPQHLNHP QGGTMQAQNF GAIAGTVIKQ SQASGSITGG 240 TAAQPKQRVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY 300 VKFLQLQVKG GGDFIQMSTD GGSLPRNSNG NHTSSSNDSL TVTEQQVAKL MEEDMGSAMQ 360 YLQGKGLCLM PISLATAIST VTCQSRNPMI NNANQNNGSS NHPLLQSSGE GSSSPSMSVL 420 TVQSATMGNG GVDGSVKDAA SVSKP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 265 | 270 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24260.1 | 8e-64 | bHLH family protein |