PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756162.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 492aa MW: 55305.5 Da PI: 7.0813

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.1	3e-18	28	83	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kRt t+ q+++Le++++++r ps e++++LA ++gLte+q++ WF+ rR k+k+ XP_022756162.1 28 KKRTLKTPAQVTALESFYKEHRFPSDEMKAQLAVQIGLTEKQISSWFCHRRLKDKR 83 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MQICSCLCFY NSGEVQTKEN KVSLDVFKKR TLKTPAQVTA LESFYKEHRF PSDEMKAQLA 60 VQIGLTEKQI SSWFCHRRLK DKRRDESYAN GRQDHSSGVI QDRGSGLRQD SCGSIKQGDY 120 RNIDPREVES QRIYGQDFPA ADLKYERRSH QNPHDAQMED TSSEKNGAIM QINPRSAKSM 180 GYKPSGYLKV KGGNENPAIT AVKRQLGRHY QEEGPLLGIE FDPLPPGAFE FPSSNPVNEP 240 IYDGDPQQTH SPDISGVIKL PNLNITNEVH NSKMSSQDSH MEGANEIQDR KSHHQLKYKS 300 SFLCPNPFPG QNSSSDIYNS SAEKTAVSDC KQSLMSSKLA VERMGSDSSS NHPGPYCWKI 360 ANEHEKPWLH DDDSHTYKVP KNENLSRTSN LIRGCSESLV TERGPFVRMA KVEKLDGEWK 420 PNKEYPVRVK IDPTNEMRVA KGINVQFPQQ DFVANASHAR LPLLTNQTRG SSMDVPSSFS 480 EDETAETSSS LD

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MQICSCLCFY NSGEVQTKEN KVSLDVFKKR TLKTPAQVTA LESFYKEHRF PSDEMKAQLA  60
VQIGLTEKQI SSWFCHRRLK DKRRDESYAN GRQDHSSGVI QDRGSGLRQD SCGSIKQGDY  120
RNIDPREVES QRIYGQDFPA ADLKYERRSH QNPHDAQMED TSSEKNGAIM QINPRSAKSM  180
GYKPSGYLKV KGGNENPAIT AVKRQLGRHY QEEGPLLGIE FDPLPPGAFE FPSSNPVNEP  240
IYDGDPQQTH SPDISGVIKL PNLNITNEVH NSKMSSQDSH MEGANEIQDR KSHHQLKYKS  300
SFLCPNPFPG QNSSSDIYNS SAEKTAVSDC KQSLMSSKLA VERMGSDSSS NHPGPYCWKI  360
ANEHEKPWLH DDDSHTYKVP KNENLSRTSN LIRGCSESLV TERGPFVRMA KVEKLDGEWK  420
PNKEYPVRVK IDPTNEMRVA KGINVQFPQQ DFVANASHAR LPLLTNQTRG SSMDVPSSFS  480
EDETAETSSS LD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	85	RRLKDKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	7e-89	HB-other family protein