PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756161.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 510aa MW: 57324.4 Da PI: 6.4682

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57	3.2e-18	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kRt t+ q+++Le++++++r ps e++++LA ++gLte+q++ WF+ rR k+k+ XP_022756161.1 20 KKRTLKTPAQVTALESFYKEHRFPSDEMKAQLAVQIGLTEKQISSWFCHRRLKDKR 75 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MEDSGEVQTK ENKVSLDVFK KRTLKTPAQV TALESFYKEH RFPSDEMKAQ LAVQIGLTEK 60 QISSWFCHRR LKDKRRDESY ANGRQDHSSG VIQDRGSGLR QDSCGSIKQG DYRNIDPREV 120 ESQRIYGQDF PAADLKYERR SHQNPHDAQM EDTSSESSLS LHDQLFSENR DPYDMQNSAK 180 LAENGAIMQI NPRSAKSMGY KPSGYLKVKG GNENPAITAV KRQLGRHYQE EGPLLGIEFD 240 PLPPGAFEFP SSNPVNEPIY DGDPQQTHSP DISGVIKLPN LNITNEVHNS KMSSQDSHME 300 GANEIQDRKS HHQLKYKSSF LCPNPFPGQN SSSDIYNSSA EKTAVSDCKQ SLMSSKLAVE 360 RMGSDSSSNH PGPYCWKIAN EHEKPWLHDD DSHTYKVPKN ENLSRTSNLI RGCSESLVTE 420 RGPFVRMAKV EKLDGEWKPN KEYPVRVKID PTNEMRVAKG INVQFPQQDF VANASHARLP 480 LLTNQTRGSS MDVPSSFSED ETAETSSSLD

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MEDSGEVQTK ENKVSLDVFK KRTLKTPAQV TALESFYKEH RFPSDEMKAQ LAVQIGLTEK  60
QISSWFCHRR LKDKRRDESY ANGRQDHSSG VIQDRGSGLR QDSCGSIKQG DYRNIDPREV  120
ESQRIYGQDF PAADLKYERR SHQNPHDAQM EDTSSESSLS LHDQLFSENR DPYDMQNSAK  180
LAENGAIMQI NPRSAKSMGY KPSGYLKVKG GNENPAITAV KRQLGRHYQE EGPLLGIEFD  240
PLPPGAFEFP SSNPVNEPIY DGDPQQTHSP DISGVIKLPN LNITNEVHNS KMSSQDSHME  300
GANEIQDRKS HHQLKYKSSF LCPNPFPGQN SSSDIYNSSA EKTAVSDCKQ SLMSSKLAVE  360
RMGSDSSSNH PGPYCWKIAN EHEKPWLHDD DSHTYKVPKN ENLSRTSNLI RGCSESLVTE  420
RGPFVRMAKV EKLDGEWKPN KEYPVRVKID PTNEMRVAKG INVQFPQQDF VANASHARLP  480
LLTNQTRGSS MDVPSSFSED ETAETSSSLD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	77	RRLKDKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	4e-89	HB-other family protein