PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022756051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | YABBY | ||||||||
Protein Properties | Length: 183aa MW: 20488 Da PI: 7.443 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 231.3 | 2.4e-71 | 2 | 157 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 +++ +se+vCyv+CnfCntilavsvP tslf++vtvrCGhC++llsvn+ ++ q+++ ++ ++++ ++++++l++ +++ + ++ XP_022756051.1 2 SLDLASERVCYVHCNFCNTILAVSVPCTSLFNIVTVRCGHCANLLSVNMGTSLQTIPIQDA--------QKQQINTDQDHLNKECGSSS-ECNKF 87 567799***************************************************9996........34444444444444333222.22233 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s+ ++ ++e+pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_022756051.1 88 SA---FDSAEDEAPRMPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 157 33...35677899**999.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MSLDLASERV CYVHCNFCNT ILAVSVPCTS LFNIVTVRCG HCANLLSVNM GTSLQTIPIQ 60 DAQKQQINTD QDHLNKECGS SSECNKFSAF DSAEDEAPRM PPIRPPEKRQ RVPSAYNRFI 120 KEEIQRIKAS NPDISHREAF STAAKNWAHF PHIHFGLKLD GNKQAKLDQA FADQGTQNSN 180 GYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 3e-87 | YABBY family protein |