PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022755153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 28764.4 Da PI: 8.1902 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.2 | 1.2e-15 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W +eEd++l+++++ +G g+W+t++++ g+ R +k+c++rw +yl XP_022755153.1 13 RGLWKPEEDLILKNYIETHGEGNWATVSKRSGLMRGGKSCRLRWKNYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.2e-16 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_022755153.1 66 RGGMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 67789*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MENNKETKAQ PKRGLWKPEE DLILKNYIET HGEGNWATVS KRSGLMRGGK SCRLRWKNYL 60 RPNIKRGGMS KEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKKSILGKR 120 KAVDSNKKQI ENEDTETLQD SKKPSQSHNS QPIFSTSPKR TTEGLDLDEK KEVKEQISVR 180 DTSWMERAVQ CFNNDYDYDM VETPVMMQPN YSNFVFDEDP FPFYLDSFVQ FEAFGTDSDV 240 GIQSFLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 2e-68 | MYB family protein |