PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754909.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HRT-like

Protein Properties

Length: 660aa MW: 72216.1 Da PI: 8.9397

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	42.4	1.2e-13	239	267	1	29
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGm 29 +CG++l+d s+C+++Pv+gRK C+eHKG+ XP_022754909.1 239 TCGLLLGDDSICRKPPVEGRKMCAEHKGK 267 7***************************7 PP
2	HRT-like	52.8	6.5e-17	328	358	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+++dGs C+rqPv gR+RC HKG++i XP_022754909.1 328 ICGVAMDDGSLCRRQPVSGRQRCDLHKGRKI 358 8***************************997 PP
3	HRT-like	49.6	6.4e-16	412	442	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l++G +C++qP +gR RCe HKGmR+ XP_022754909.1 412 ICGVELGNGYFCTKQPGRGRDRCEDHKGMRV 442 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MPMAEAILAA VDTRSKREDH HRTKDGSLFS KWKVLIGPDD WKDYSVGKEG VARYRDNRGK 60 LDPNNDVVVY LGVADNVRRR LQQYGRTGDH LGSGGSGEKA SGFFEDMFSR GFSIAYRWAP 120 MKSTADAQRM EAGRLKTYDY AWNKVSNGPR RHDDILEKLD KCASNCTTQA IFSRKHPPFL 180 QKQLGIKIKA SKLLSHDNQF SKYADGESYN FLSPVFKFSR SQPRLVLDHG GSNENDTITC 240 GLLLGDDSIC RKPPVEGRKM CAEHKGKETK GSSMRLSTSE KSQLQKAYTE HVVLDNGDFN 300 VHGAKTPSFG LVPLLAGGNP EIEQCSPICG VAMDDGSLCR RQPVSGRQRC DLHKGRKICS 360 SNSKRVPYVV FDSDADEDSG FYKRSSELFI PGKVETGVAP QRPVFSKGYD TICGVELGNG 420 YFCTKQPGRG RDRCEDHKGM RVNSLFSGLD RESTLDVSDT GSRFNPHNWN YGSSSSSKSI 480 CGATTCNGSF CQRTVKGNDR CEQHLDYGGR SSSSNSGARY SNHGGSSSSI CGAPTHNGSS 540 CQRTVMGNGR CFQHLNYDGG SSSSSSSSSN FSSRYLNYGG CSTSICGAPT CNGSFCQRTV 600 KGNGRCFQHL NYGDSSSSSS NFSSPYSYYG GCSTSICGAP TRNGSFCRRT VKGNGRCWQH

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MPMAEAILAA VDTRSKREDH HRTKDGSLFS KWKVLIGPDD WKDYSVGKEG VARYRDNRGK  60
LDPNNDVVVY LGVADNVRRR LQQYGRTGDH LGSGGSGEKA SGFFEDMFSR GFSIAYRWAP  120
MKSTADAQRM EAGRLKTYDY AWNKVSNGPR RHDDILEKLD KCASNCTTQA IFSRKHPPFL  180
QKQLGIKIKA SKLLSHDNQF SKYADGESYN FLSPVFKFSR SQPRLVLDHG GSNENDTITC  240
GLLLGDDSIC RKPPVEGRKM CAEHKGKETK GSSMRLSTSE KSQLQKAYTE HVVLDNGDFN  300
VHGAKTPSFG LVPLLAGGNP EIEQCSPICG VAMDDGSLCR RQPVSGRQRC DLHKGRKICS  360
SNSKRVPYVV FDSDADEDSG FYKRSSELFI PGKVETGVAP QRPVFSKGYD TICGVELGNG  420
YFCTKQPGRG RDRCEDHKGM RVNSLFSGLD RESTLDVSDT GSRFNPHNWN YGSSSSSKSI  480
CGATTCNGSF CQRTVKGNDR CEQHLDYGGR SSSSNSGARY SNHGGSSSSI CGAPTHNGSS  540
CQRTVMGNGR CFQHLNYDGG SSSSSSSSSN FSSRYLNYGG CSTSICGAPT CNGSFCQRTV  600
KGNGRCFQHL NYGDSSSSSS NFSSPYSYYG GCSTSICGAP TRNGSFCRRT VKGNGRCWQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-76	HRT-like family protein