PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754908.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HRT-like

Protein Properties

Length: 685aa MW: 74977.3 Da PI: 8.8093

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	42.3	1.3e-13	264	292	1	29
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGm 29 +CG++l+d s+C+++Pv+gRK C+eHKG+ XP_022754908.1 264 TCGLLLGDDSICRKPPVEGRKMCAEHKGK 292 7***************************7 PP
2	HRT-like	52.8	6.8e-17	353	383	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+++dGs C+rqPv gR+RC HKG++i XP_022754908.1 353 ICGVAMDDGSLCRRQPVSGRQRCDLHKGRKI 383 8***************************997 PP
3	HRT-like	49.6	6.7e-16	437	467	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l++G +C++qP +gR RCe HKGmR+ XP_022754908.1 437 ICGVELGNGYFCTKQPGRGRDRCEDHKGMRV 467 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MPMAEAILAA VDTRSKREDH HRTKDGSLFS KWKVLIGPDD WKDYSVGKEG VARYRCENLP 60 RSLEPGIYEL AIYCHGSASR DNRGKLDPNN DVVVYLGVAD NVRRRLQQYG RTGDHLGSGG 120 SGEKASGFFE DMFSRGFSIA YRWAPMKSTA DAQRMEAGRL KTYDYAWNKV SNGPRRHDDI 180 LEKLDKCASN CTTQAIFSRK HPPFLQKQLG IKIKASKLLS HDNQFSKYAD GESYNFLSPV 240 FKFSRSQPRL VLDHGGSNEN DTITCGLLLG DDSICRKPPV EGRKMCAEHK GKETKGSSMR 300 LSTSEKSQLQ KAYTEHVVLD NGDFNVHGAK TPSFGLVPLL AGGNPEIEQC SPICGVAMDD 360 GSLCRRQPVS GRQRCDLHKG RKICSSNSKR VPYVVFDSDA DEDSGFYKRS SELFIPGKVE 420 TGVAPQRPVF SKGYDTICGV ELGNGYFCTK QPGRGRDRCE DHKGMRVNSL FSGLDRESTL 480 DVSDTGSRFN PHNWNYGSSS SSKSICGATT CNGSFCQRTV KGNDRCEQHL DYGGRSSSSN 540 SGARYSNHGG SSSSICGAPT HNGSSCQRTV MGNGRCFQHL NYDGGSSSSS SSSSNFSSRY 600 LNYGGCSTSI CGAPTCNGSF CQRTVKGNGR CFQHLNYGDS SSSSSNFSSP YSYYGGCSTS 660 ICGAPTRNGS FCRRTVKGNG RCWQH

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MPMAEAILAA VDTRSKREDH HRTKDGSLFS KWKVLIGPDD WKDYSVGKEG VARYRCENLP  60
RSLEPGIYEL AIYCHGSASR DNRGKLDPNN DVVVYLGVAD NVRRRLQQYG RTGDHLGSGG  120
SGEKASGFFE DMFSRGFSIA YRWAPMKSTA DAQRMEAGRL KTYDYAWNKV SNGPRRHDDI  180
LEKLDKCASN CTTQAIFSRK HPPFLQKQLG IKIKASKLLS HDNQFSKYAD GESYNFLSPV  240
FKFSRSQPRL VLDHGGSNEN DTITCGLLLG DDSICRKPPV EGRKMCAEHK GKETKGSSMR  300
LSTSEKSQLQ KAYTEHVVLD NGDFNVHGAK TPSFGLVPLL AGGNPEIEQC SPICGVAMDD  360
GSLCRRQPVS GRQRCDLHKG RKICSSNSKR VPYVVFDSDA DEDSGFYKRS SELFIPGKVE  420
TGVAPQRPVF SKGYDTICGV ELGNGYFCTK QPGRGRDRCE DHKGMRVNSL FSGLDRESTL  480
DVSDTGSRFN PHNWNYGSSS SSKSICGATT CNGSFCQRTV KGNDRCEQHL DYGGRSSSSN  540
SGARYSNHGG SSSSICGAPT HNGSSCQRTV MGNGRCFQHL NYDGGSSSSS SSSSNFSSRY  600
LNYGGCSTSI CGAPTCNGSF CQRTVKGNGR CFQHLNYGDS SSSSSNFSSP YSYYGGCSTS  660
ICGAPTRNGS FCRRTVKGNG RCWQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	7e-87	HRT-like family protein