PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753236.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 489aa    MW: 53897.8 Da    PI: 5.654
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3551.2e-1081034831374
            GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevs 88 
                     lv+lL+++Aea++  +++  la+ +L rl+el+sp++ ++m+RlaayfteAL+  l +s+ +  k l    p  + +e+++++ laa++l++++s
  XP_022753236.1 103 LVHLLMAAAEALTGANKSreLARVILVRLKELVSPNDgTNMERLAAYFTEALQGLLEGSGGGHGKHLitsgPQHHRNEHHQTDMLAAFQLLQDMS 197
                     68**********986665559***********8887669******************98655555542110555555555*************** PP

            GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
                     P++kf+h+taNqaIleav +++r+Hi+Dfdi++G+QW++L+qaLasR++gpp  +lRiT++++  sg  s  +++etg+rL  fA+++g pf+f+
  XP_022753236.1 198 PYVKFGHFTANQAILEAVTHDRRIHIVDFDIMEGIQWASLMQALASRKDGPPtpHLRITALSRGGSGrsSIGTIQETGRRLVAFAASIGQPFSFH 292
                     ************************************************776556*********888898999*********************** PP

            GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdslea 273
                         ++ e++++++ ++ +gEal++n++l+l ++  +  ++     ++L+  k+l+P++v++ve+e+   +++ F+ rf+++l++ysa++dslea
  XP_022753236.1 293 QCRLDSDETFRPSAVKLVRGEALVINCMLHLPHFSYRAPDSV---ASLLSGAKTLNPRLVTLVEEEIGPiGDGGFVGRFMDSLHHYSAVYDSLEA 384
                     *9999****************************985555555...59*******************9888************************* PP

            GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpL 367
                     ++p +s++r+ vEr++lg++i   +a   +   + +e+   W+++l ++GFkpv++s  + +qaklll  ++ dgyrvee  ++ l+lgWk+r+L
  XP_022753236.1 385 GFPMQSRARALVERVFLGPQIAGSLARIYRT--QGEEESCPWSKWLAAVGFKPVNISFANHCQAKLLLGLFN-DGYRVEELaNNRLILGWKSRRL 476
                     **************************99876..888889*********************************.******97588899******** PP

            GRAS 368 vsvSaWr 374
                     +s+S W+
  XP_022753236.1 477 LSASLWT 483
                     ******6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MAMAIDNAFE VDFSSYSSIT TTTTTTTDDD PACTWNDWGS PVVDWDSLSS ERDEFQDLIE  60
SMMDDGTELE LARVGHETSN SVSTDTMVAH QETNGEDFKG LRLVHLLMAA AEALTGANKS  120
RELARVILVR LKELVSPNDG TNMERLAAYF TEALQGLLEG SGGGHGKHLI TSGPQHHRNE  180
HHQTDMLAAF QLLQDMSPYV KFGHFTANQA ILEAVTHDRR IHIVDFDIME GIQWASLMQA  240
LASRKDGPPT PHLRITALSR GGSGRSSIGT IQETGRRLVA FAASIGQPFS FHQCRLDSDE  300
TFRPSAVKLV RGEALVINCM LHLPHFSYRA PDSVASLLSG AKTLNPRLVT LVEEEIGPIG  360
DGGFVGRFMD SLHHYSAVYD SLEAGFPMQS RARALVERVF LGPQIAGSLA RIYRTQGEEE  420
SCPWSKWLAA VGFKPVNISF ANHCQAKLLL GLFNDGYRVE ELANNRLILG WKSRRLLSAS  480
LWTSPDTEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-171GRAS family protein