PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752474.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 680aa MW: 77840.7 Da PI: 7.8451

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.4e-21	63	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+A+++GFs+r+++++ + + t+r fvC + g++ +++++ k +r+r+++r+gC+a l+++k + ++w+vt ++ +HnHel XP_022752474.1 63 EFYSEFARQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKTSNNGKPQRNRKSSRCGCQAYLRISKVTdlgAAEWRVTGFVDHHNHELL 156 6************9998877356667999**********9999*****************99988889************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MMSEDAGQML IVYDDPSDQR SLSLGETSST EDSPDETRLS LETINDAIPY IGQRFATHDA 60 AYEFYSEFAR QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPVKTSN NGKPQRNRKS 120 SRCGCQAYLR ISKVTDLGAA EWRVTGFVDH HNHELLEPNQ VRFLPAYRTI SDADKNRILM 180 FAKTGISVQQ MMRLMELEKC VEPGYLPFTE KDVRNLLQSF RKLDQEDESI DLLRMCRNIK 240 EKDPNFKFEY TLDSHNRLEN IAWSYASSVQ SYDIFGDAVV FDTTHRLTAL DMPLGIWVGM 300 NNYGMPCFFG CVLLQEENSR SLSWALKALL GFMNGKAPQT ILTDQSMCLK EAIAIEIPTT 360 KHALCIWMIV AKFPSWFNAV LGERYNEWKA EFYRLYNLES IEDFELGWRD MVNSFGLHTN 420 RHIANLFALR TMWALPYLRN HFFAGMTTSG HSKAINAFIQ RFLSAQTRLA HFVEQVAAAV 480 DFKDQAAEQQ TMQQNLQNIC LKTGAPMESH AASILTPFAF SKLQEQLVLA EHYASFQMDD 540 GFLVRHHTKL EGGRKVYWVP REGIISCSCH QFEFSGILCR HALRVLSTGN CFQIPDRYLP 600 LRWRRISTSP AKLLHSSSSD HRERIQLLQN MVSTLVAESA KSRERLDVAT EQVSILLSRI 660 REQPVASQGV RDISPIHRNL

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MMSEDAGQML IVYDDPSDQR SLSLGETSST EDSPDETRLS LETINDAIPY IGQRFATHDA  60
AYEFYSEFAR QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPVKTSN NGKPQRNRKS  120
SRCGCQAYLR ISKVTDLGAA EWRVTGFVDH HNHELLEPNQ VRFLPAYRTI SDADKNRILM  180
FAKTGISVQQ MMRLMELEKC VEPGYLPFTE KDVRNLLQSF RKLDQEDESI DLLRMCRNIK  240
EKDPNFKFEY TLDSHNRLEN IAWSYASSVQ SYDIFGDAVV FDTTHRLTAL DMPLGIWVGM  300
NNYGMPCFFG CVLLQEENSR SLSWALKALL GFMNGKAPQT ILTDQSMCLK EAIAIEIPTT  360
KHALCIWMIV AKFPSWFNAV LGERYNEWKA EFYRLYNLES IEDFELGWRD MVNSFGLHTN  420
RHIANLFALR TMWALPYLRN HFFAGMTTSG HSKAINAFIQ RFLSAQTRLA HFVEQVAAAV  480
DFKDQAAEQQ TMQQNLQNIC LKTGAPMESH AASILTPFAF SKLQEQLVLA EHYASFQMDD  540
GFLVRHHTKL EGGRKVYWVP REGIISCSCH QFEFSGILCR HALRVLSTGN CFQIPDRYLP  600
LRWRRISTSP AKLLHSSSSD HRERIQLLQN MVSTLVAESA KSRERLDVAT EQVSILLSRI  660
REQPVASQGV RDISPIHRNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein