PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752130.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 599aa    MW: 66046.2 Da    PI: 4.7246
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS376.82.6e-1152325992374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++Ll+cA+  +s + e+a +lL rl+e +s++g+p++R+++yfteAL +r++    +  k l++ et+   s++ + ++k++++++P+ kf+hl
  XP_022752130.1 232 LKALLDCARKAES-EPERAIKLLIRLRESVSERGNPTERVVFYFTEALYSRISL---QAEKRLTMLETT---SEDFTLSYKALNDACPYSKFAHL 319
                     689******8776.889999*********************************9...777778888887...89999****************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+e ++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p  g     +l +tg+rL +fA+ l+++fef++ + + +++
  XP_022752130.1 320 TANQAILEATEPASKIHIVDFGIVQGVQWAALLQALATRSGGKPtRIRISGIPAPVLGssPGPSLYATGNRLCDFAKLLDLNFEFEP-ILTPIKE 413
                     ****************************************88777*********999888999************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++rv+++E+laVn++lql++llde+  + +   + L+l ksl+Pk+v++ e ea++n+  F++rf +al+yysa+f+sle +lpr+s+eri
  XP_022752130.1 414 LNESSFRVDEDEVLAVNFMLQLFNLLDETPVTVE---TALRLAKSLNPKIVTLGEYEASLNGVGFVTRFKNALRYYSAMFESLEPNLPRDSQERI 505
                     **************************99988888...9********************************************************* PP

            GRAS 284 kvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                      vEr llgr+i  ++  e+ae rrer+e +e+W+  +e+aGF++v+ls++a +qaklll +++ s  y++ e++  ++ l W++ pL++vS+Wr
  XP_022752130.1 506 QVERLLLGRKIAGIIGPEEAEnRRERMEDKEQWKLLMESAGFETVALSHYAISQAKLLLWNYNySSSYSLIESQPGFLsLAWNEVPLLTVSSWR 599
                     ****************999988*****************************************9999**9999988888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQEQEQQQQ QHLGLNQFSV NPWPNTHPGV SNSTNLGYGL  60
SGPGFTDPFQ GDTGEGFQFP NMGHHHSGGF RFPDFGGAAG GEFDTDEWMD SLMNSGDSTD  120
SSNLPSGCDV WQNNADFGLY GADPFSACPN RLSVACSPSS DLNRVIFSTE EQKNPSSLQA  180
QPQLPTWVPS SPPPPPQVTV KETKTSSPTP HKNNAAGVSS DSPESESAPP LLKALLDCAR  240
KAESEPERAI KLLIRLRESV SERGNPTERV VFYFTEALYS RISLQAEKRL TMLETTSEDF  300
TLSYKALNDA CPYSKFAHLT ANQAILEATE PASKIHIVDF GIVQGVQWAA LLQALATRSG  360
GKPTRIRISG IPAPVLGSSP GPSLYATGNR LCDFAKLLDL NFEFEPILTP IKELNESSFR  420
VDEDEVLAVN FMLQLFNLLD ETPVTVETAL RLAKSLNPKI VTLGEYEASL NGVGFVTRFK  480
NALRYYSAMF ESLEPNLPRD SQERIQVERL LLGRKIAGII GPEEAENRRE RMEDKEQWKL  540
LMESAGFETV ALSHYAISQA KLLLWNYNYS SSYSLIESQP GFLSLAWNEV PLLTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein