PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022751724.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 381aa    MW: 42597.7 Da    PI: 8.2367
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022751724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.39.6e-07137157526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G C+ Gd+C FaHg
  XP_022751724.1 137 ACPDFRK-GNCRKGDSCEFAHG 157
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MMLGDTHRPN PTVHVQPWTN FDDDQMVEIY SPLKYNAADN YFNNNSNPFY LQEALAALQR  60
YLPSNEPDVE WDSEFSGLDK PDSPVDAYTC DQFRMFEFKV RRCARGQSHD WTQCPYAHPG  120
EKARRRDPRK CHYSGTACPD FRKGNCRKGD SCEFAHGVFE CWLHPARYRT QPCKDGPCCR  180
RRVCFFAHTP GQLRVVNSAD SYDGSPSSAK RLTFWSSPGS GSPPMSPRAE SSLPVSPMAQ  240
SLSRSLGSAS INETVASLRN LQLGKIKSSP SSWNKQVGCS PSPSPSPSPS GFGSPRGAVI  300
RPGFCSLPST PTRNLTRPGV RYLDFWDKGC EEEPMMERVE SGRDLRAKMF EKLSKENSLE  360
RVNPGQCSGG PDVNWVSDLV K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-133C3H family protein