PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022751126.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 25447.9 Da PI: 5.8049 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.1 | 5.4e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELSvLCda+va+iifsstgkl+ey+s XP_022751126.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 43.5 | 1.4e-15 | 105 | 171 | 32 | 98 |
K-box 32 qreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++R++ Ge+Le L+++eLqqLe+ Le +l+++ +kK + ++++i++l+ k +l een++L+ ++ XP_022751126.1 105 SHQLRQMRGEELEGLNIEELQQLEKFLEAGLSRVIEKKGQRIIREINDLKTKGMQLMEENERLKLEI 171 3789***********************************************************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEYASS 60 SMKEILERYN LRSKNLEKLE QPSLELQLVE NSNHSMLSME VAEKSHQLRQ MRGEELEGLN 120 IEELQQLEKF LEAGLSRVIE KKGQRIIREI NDLKTKGMQL MEENERLKLE ISNGRREVAG 180 DSENVFCEEG QSSESVTNVC TSNATPHDHE SSNTSLKLGL PFSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 6e-99 | MIKC_MADS family protein |