PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022750121.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 381aa    MW: 42738.1 Da    PI: 8.2384
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022750121.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.61.8e-07144164526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C +f++ G Ck Gd+C FaHg
  XP_022750121.1 144 ACLDFRK-GNCKKGDSCEFAHG 164
                     6999***.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MQFIMKRIVP SFRNREQCPK MMIGEPTRQN PTVKIPAWDP FNDLTSNFPS VNYNCNAPDS  60
PCPVDYLPSL HRYLPSNDFE SDSLSEDSDL PVDAFSCDQF RMYEFKVRRC ARGRSHDWTE  120
CPYAHPGEKA RRRDPRKFHY SGTACLDFRK GNCKKGDSCE FAHGVFECWL HPARYRTQPC  180
KDGTSCKRRV CFFAHTPEQL RVLPQQSPRG NGSGSGDLDY VGSPIRHRLD FVSSPTSILA  240
SPPISPPSDS PPMSPNGTFN SVSELASSMR NLQLGKAKMS GDCSWGLRMG SGFGSPRGST  300
LRPGFCSSPS TPTRTPTRSG LGQFDLWECN AFEEEPAMER VESGRDLRAR MYAKLSKENS  360
LDRLDPTGSG PDVGWVYELV K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-114C3H family protein