PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022749719.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 321aa    MW: 36022.2 Da    PI: 7.6865
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022749719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.78.3e-085882126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    +kt+ C+ f+  GtC+ G+ C+FaHg
  XP_022749719.1 58 FKTRMCSKFRL-GTCRNGEGCNFAHG 82
                    69*********.*************8 PP
2zf-CCCH27.74.8e-09119141325
                     S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaH 25 
                     ++lC+ f+ + +C+yGdrC+F H
  XP_022749719.1 119 MKLCKKFYNGEECPYGDRCNFLH 141
                     689******66************ PP
3zf-CCCH42.31.3e-13204230127
                     --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                     +kt+lC  +  tG+C++G++C+FaHg+
  XP_022749719.1 204 WKTKLCIKWETTGHCPFGEKCHFAHGQ 230
                     8************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MNDGQFDPHS EVEQQQQPPF KRPRHSDDSQ SNVVRCTPTN FRMPLNPAVN KGTSNIFFKT  60
RMCSKFRLGT CRNGEGCNFA HGIEDLRQPP PNWQELVGGC DEERTSGNWD DDQKIIHRMK  120
LCKKFYNGEE CPYGDRCNFL HEAPSKFRDD MGRFRESSAI SIGTTGPSAG HGTASDHSEG  180
NRPLNNTDSD AFRGNMKPMY PVYWKTKLCI KWETTGHCPF GEKCHFAHGQ SELQGIGVRV  240
DGDLGNTGPG LARTASISTK IHNLPADDPP TVTASVRSLN EEAQAKKCLF KWKGPRKINR  300
IYGDWLDDLP LVHNLPSQVE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.11e-100C3H family protein