PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022749235.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 228aa    MW: 25316.2 Da    PI: 4.9428
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022749235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.55.5e-212972245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + e++s rqvtfskRrng++KKA+E +vLC a++ +i fs++gk
  XP_022749235.1 29 KLEDESSRQVTFSKRRNGLFKKASEFCVLCRANIGIIAFSPKGK 72
                    6799***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MATLKQSNNK ENSNTTKVMR GRQKIQIKKL EDESSRQVTF SKRRNGLFKK ASEFCVLCRA  60
NIGIIAFSPK GKPFCFGHPN VDIMLDRCLR GNPTLHVQDG GDSAASGITL CFVEFNEEFQ  120
EAWEKLQEEK NRIKEIEQEK EERKNEGEFW WDEPIDNMGV QELEEYVKAM EESRNNELTG  180
DGFEAATVAN AGGLGNGFTN QNGGFGSAGG SGSAYGYFGL DFGGSGRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.16e-33M-type_MADS family protein