PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022749220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 292aa MW: 33562.4 Da PI: 8.5975 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 153.3 | 1.1e-47 | 17 | 143 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yL++ + gkkl ++i ++iy+++PwdLp k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s XP_022749220.1 17 PGFRFHPTEEELLNFYLRNMIYGKKLGY-DIIGFLNIYHHDPWDLPGLSKIGEREWYFFVPRDRKHGNGGRPNRTTENGFWKATGSDRKIVSLsd 110 9************************999.99***************8778899*************************************99766 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfykgrap+g+ktdWvm+eyrl XP_022749220.1 111 PKRIIGLKKTLVFYKGRAPRGSKTDWVMNEYRL 143 6778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MSSQSNMDDT TPKIELPGFR FHPTEEELLN FYLRNMIYGK KLGYDIIGFL NIYHHDPWDL 60 PGLSKIGERE WYFFVPRDRK HGNGGRPNRT TENGFWKATG SDRKIVSLSD PKRIIGLKKT 120 LVFYKGRAPR GSKTDWVMNE YRLPDGCSLP KDIVLCKIYR KATSLKVLEQ RAALEEELKA 180 MNNTSPSSPL SSLEAISHSS PKEELVPSIS VPQVVFKKEI EEEDTMEEKR SDGIAKEKKI 240 SSASLHLPLG KEILPELQLP KMLSDWTQDQ FWTQLNSPWF QNLTPYANIL NF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-119 | NAC family protein |