PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022748226.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 206aa MW: 23281.1 Da PI: 5.2184 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 75.7 | 3.5e-24 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien +qv fskRrng+lKKA+ELS+LCdaev viifss +k+y +ss XP_022748226.1 9 KKIENLNSKQVMFSKRRNGLLKKAKELSILCDAEVGVIIFSSIDKVYQWSS 59 68***********************************************96 PP | |||||||
2 | K-box | 44.5 | 6.5e-16 | 66 | 125 | 41 | 100 |
K-box 41 edLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++L+ Ls+keLqqLe+qL++++ +++++K+++lleq+++++ +e+++ e+++Lr+++ee XP_022748226.1 66 KGLDGLSFKELQQLEHQLNEGILSVKEQKEQILLEQLKRSRLQEQNTILETETLRNQVEE 125 789******************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MGKGKIEIKK IENLNSKQVM FSKRRNGLLK KAKELSILCD AEVGVIIFSS IDKVYQWSST 60 TRLNAKGLDG LSFKELQQLE HQLNEGILSV KEQKEQILLE QLKRSRLQEQ NTILETETLR 120 NQVEELQQRT SSNLLEFNPL RIRFSTTSSK ADDYDCASEG EDDDNDENDH SDTSLHLGLA 180 SDVGRKRKVA KVEPITNDSG SQVASE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 1e-38 | MIKC_MADS family protein |