PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022747846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GATA | ||||||||
Protein Properties | Length: 344aa MW: 37246.9 Da PI: 6.7749 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.8 | 1.1e-16 | 250 | 283 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C t Tp+WR gp g+ktLCnaCG++y++ + XP_022747846.1 250 CMHCELTRTPQWRAGPMGPKTLCNACGVRYKSGR 283 99*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MIGSTNFIDE IDCGSFFDHI DDLLDFPNGD VEAGLSAPDS AINAAAFPSI WTTHSESLPG 60 SDSVFSNNNV SDLSAELSVP YEDIVQLEWL SNFVEDSHCG ASLTVKKEES FSINKDSSHP 120 QFQISSPVSV LESSSSCSGE KTLLCSPETA APGRHGRARS KRPRPATFNP RSAVQLISPT 180 SSVNENDIPQ QFVVPKVPSD SENYAESQPL IKIPGQVNPE HKKKKKMKLS LPAAPAVNIQ 240 NPSGQAVRKC MHCELTRTPQ WRAGPMGPKT LCNACGVRYK SGRLFPEYRP AASPTFVPSL 300 HSNSHKKVLE MRTKSGAAPP TTTMVTADSP ELIPNKCNPA LNYI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 165 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 5e-42 | GATA family protein |