PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022747845.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 344aa    MW: 37246.9 Da    PI: 6.7749
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022747845.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.81.1e-16250283134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  t Tp+WR gp g+ktLCnaCG++y++ +
  XP_022747845.1 250 CMHCELTRTPQWRAGPMGPKTLCNACGVRYKSGR 283
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MIGSTNFIDE IDCGSFFDHI DDLLDFPNGD VEAGLSAPDS AINAAAFPSI WTTHSESLPG  60
SDSVFSNNNV SDLSAELSVP YEDIVQLEWL SNFVEDSHCG ASLTVKKEES FSINKDSSHP  120
QFQISSPVSV LESSSSCSGE KTLLCSPETA APGRHGRARS KRPRPATFNP RSAVQLISPT  180
SSVNENDIPQ QFVVPKVPSD SENYAESQPL IKIPGQVNPE HKKKKKMKLS LPAAPAVNIQ  240
NPSGQAVRKC MHCELTRTPQ WRAGPMGPKT LCNACGVRYK SGRLFPEYRP AASPTFVPSL  300
HSNSHKKVLE MRTKSGAAPP TTTMVTADSP ELIPNKCNPA LNYI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.15e-42GATA family protein