PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022746354.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family B3
Protein Properties Length: 448aa    MW: 50942.2 Da    PI: 9.7521
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022746354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3581.7e-1890179299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +k + ps+v+   ++ lpk+f+++  ++k e++t++lede+g++++ k+ ++k +    l++GW++F  a++L egD++vF+l++ s+f  +v +
  XP_022746354.1  90 VKCMHPSNVTGGFWVGLPKHFCSKQ-LPK-ENRTMVLEDEEGKEFQTKYLVEKVG----LSGGWRGFSIAHKLLEGDVCVFHLVKPSKF--KVYI 176
                     688999****************666.554.5579***************444444....************************998888..8888 PP

                     E-S CS
              B3  97 frk 99 
                     +r+
  XP_022746354.1 177 VRR 179
                     876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MAVSPKQRKS PVKVKRGRPP KCKLFRKKLS GLDKITVNQL VSHEKEKAQC HKRKRATYNG  60
LYKNAELKSA VMKQALEVQA NLSSEFPSLV KCMHPSNVTG GFWVGLPKHF CSKQLPKENR  120
TMVLEDEEGK EFQTKYLVEK VGLSGGWRGF SIAHKLLEGD VCVFHLVKPS KFKVYIVRRK  180
GSDEVDVALG LLKLESSTQQ IELEKEPKIF VKTRDKPLEN YGMYENRISV EKTGKFLEVL  240
PLDISEKAIQ NDRLDLGSEV LDSIKLSESM IDFKEVKNFE DFNILVNGLI IDSEFSKYLK  300
TKYYELCCNQ KSFLHENLLE GLNCKLVAGV IAETINIADA IRAAKLTTSH HSFLTWGQTL  360
KSFKGLGMKV GFLSARLDQL MNLSMKSRRY QEARLEQINA NEKKRKLEAK LVEVTEALNR  420
LVVDIGSLEE ENADRLEILF QEVASAPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.16e-37B3 family protein