PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022744908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NF-YB | ||||||||
Protein Properties | Length: 144aa MW: 16174.2 Da PI: 5.7525 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 160.4 | 2.8e-50 | 4 | 98 | 3 | 97 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 eqdr+lPianv+rimk++lP akisk+ak+t+qec++efisfvt+easdkc++e+rkt+ngdd++wal+ lGf++y++++ yl+kyre+e+ek XP_022744908.1 4 EQDRLLPIANVGRIMKQILPPGAKISKEAKQTMQECATEFISFVTGEASDKCHKENRKTMNGDDMCWALTALGFDNYADAIVRYLHKYREAEREK 98 8*******************************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MAGEQDRLLP IANVGRIMKQ ILPPGAKISK EAKQTMQECA TEFISFVTGE ASDKCHKENR 60 KTMNGDDMCW ALTALGFDNY ADAIVRYLHK YREAEREKAI QNKATCPQDK DEESSEDKRG 120 HPPQQTDEAP TPVLEFSVKK GDKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09030.1 | 2e-58 | NF-YB family protein |