PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022744469.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 323aa    MW: 35851.5 Da    PI: 7.0648
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022744469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.97.3e-151151343
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                    i n+s r  ++ kRr g+lKK +EL +LC++++++i++s++
  XP_022744469.1 11 IVNDSARRASLKKRRLGLLKKVSELTTLCGVDACLIVYSPD 51
                    7799***********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MTRKKVKLAW IVNDSARRAS LKKRRLGLLK KVSELTTLCG VDACLIVYSP DEIEPMVWPS  60
HAEVQRQLGE FHKMPESERQ KKMMNQETYL TDRVTKAQEQ LTKYQRRNKE IEMGHLMNQI  120
DQGKGLDELN LTELHGLTWL VEEKMKEIRK RIEFFQQVPF VTDGPCALGD LSFPPSSPAD  180
DLTARIGGAS DGLEGDGRST HAESLLWDQW FIDMMNNSEF KSGARSSSMR SDIGLPDYHP  240
FTGNTADDRG LPRHSFGGSS CVAAITGQPP YRNLRGPPTS DAGLPPLSSR PHGSASDMGL  300
PHESVGSSSF GPFGSDSGQL HPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAWIVNDSARRASLKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-31M-type_MADS family protein