PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743937.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 302aa    MW: 33332.7 Da    PI: 8.3328
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.24.9e-141151343
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                    i n+s r   + kRr g+lKK +EL +LC++++++i++s++
  XP_022743937.1 11 IVNDSARRACLKKRRLGLLKKVSELTTLCGVDACLIVYSPN 51
                    7799***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MTRKKVKLAW IVNDSARRAC LKKRRLGLLK KVSELTTLCG VDACLIVYSP NVTEPMFHKM  60
PESERQKKMM NQETYLTDRV TKAQEQLTKY QRRNKGVEMN HLMNQIDQDK GLDELNLTEL  120
HGLTWLVEEK MKEMRKRIEF FQQVPFVTAS PRAHGDLSLP PSSPADDLTA RIGGASGGLG  180
GDVRSTHAES LLWDQWFIDM MNNSEFKSGA RSSTMRSDIG LPDYHPCSGS TADDRGQPRH  240
SFGGSWSVAA EMGQPPYGNL RQPTSDLGLA PLSSGPHDGA SDIGLPRGSA GSINVGPFGS  300
DS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAWIVNDSARRACLKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.19e-22M-type_MADS family protein