PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743647.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 357aa MW: 41231.1 Da PI: 9.3872

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++ +++m+ ++R +k+c +rw++yl XP_022743647.1 4 RQRWRAEEDALLRAYVKQYGPREWNLLSQRMNtpLNRDAKSCLERWNNYL 53 89***********************************************7 PP
2	Myb_DNA-binding	36.8	9.2e-12	62	103	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_022743647.1 62 LTEEEQRLVICLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 69***************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MKERQRWRAE EDALLRAYVK QYGPREWNLL SQRMNTPLNR DAKSCLERWN NYLKPGIKKE 60 SLTEEEQRLV ICLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKEKNKTVDP 120 IEEGKYDGIL ETFAEKLVKE RHSSTFPMAT SNGGFLHADP PSPAPTLLPP WLSNSTNASA 180 VRPPSPSVTL SLSPTTVTAT PPIPWLQPER MSENTPVVLG NIVPHVSVPP CGENLLTSEL 240 LECCRELEDG HRAWVAHKKE AAWRLRRVEL QLESEKACRR REKMEEIESK VKALRDEQNA 300 TLDRIEAEYR EQLEGLRRDA EAKEQKLAEQ WTAKHLRLTK FLEQMGCRPR IAEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MKERQRWRAE EDALLRAYVK QYGPREWNLL SQRMNTPLNR DAKSCLERWN NYLKPGIKKE  60
SLTEEEQRLV ICLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKEKNKTVDP  120
IEEGKYDGIL ETFAEKLVKE RHSSTFPMAT SNGGFLHADP PSPAPTLLPP WLSNSTNASA  180
VRPPSPSVTL SLSPTTVTAT PPIPWLQPER MSENTPVVLG NIVPHVSVPP CGENLLTSEL  240
LECCRELEDG HRAWVAHKKE AAWRLRRVEL QLESEKACRR REKMEEIESK VKALRDEQNA  300
TLDRIEAEYR EQLEGLRRDA EAKEQKLAEQ WTAKHLRLTK FLEQMGCRPR IAEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-143	MYB family protein