PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022741601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 669aa MW: 73570.7 Da PI: 5.8945 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.3 | 8.1e-29 | 204 | 257 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_022741601.1 204 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 257 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 42.6 | 1.4e-13 | 206 | 256 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_022741601.1 206 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 256 678***********************************************7 PP | |||||||
3 | Response_reg | 75 | 2.8e-25 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+ y ev+ + +e al +l+e++ +D+++ D+ mp+mdG++ll++i e +lp+i+++a + + + + + G XP_022741601.1 26 VLVVDDDPTCLMILEKMLRTCLY-EVTKCNRAETALSMLRENKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKHVVMKGVTHG 118 89*********************.***************999999**********************6654.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + XP_022741601.1 119 ACDYLIKPVRIEALKN 134 ************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 669 aa Download sequence |
MSTASSSAAW KAGDVVPDRF PAGLRVLVVD DDPTCLMILE KMLRTCLYEV TKCNRAETAL 60 SMLRENKNGF DIVISDVHMP DMDGFKLLEH IGLEMDLPVI MMSADDGKHV VMKGVTHGAC 120 DYLIKPVRIE ALKNIWQHVV RKWKNEWKDF EQSGSVEEGD RQQKQSEDAD YSSSANEGNW 180 KSSKKRKDDE DETDERDDSS TLKKPRVVWS VELHQQFVAA VNQLGIDKAV PKKILELMNV 240 PGLTRENVAS HLQKYRLYLR RLSGVSQHQN SFMSHQEETF GPLSSLNGLD LQTLAATGQL 300 PAESLATLQA AGLGRSTAKS GVPMALVDQR NIFSFENPKL RFGEGQQQHI NGNNKQINLL 360 HGIPMTMEPK QLVGLHHTAQ SIGNVNMQVT SHGAQSGQNN SLLMQMGQPQ SRGHILNDAT 420 VGHAPRLLSS MGQPILSNGI AANVSTRNRI PENIRAPGYN PVSQASSMLN FPMNHASELP 480 GNILPLGSTP GMSSLTSKGT FQEDVNSEIK GSGGFMPSYD IFNDLNQHKP QSWELQNVSM 540 TSDASQRSNS LQGNLDLTQS VLVQQGISSG QMNGQNRSAA VVSKAMCSAG DFSEQRNAQN 600 VNQHFNTLLV DNTIRVKSEI VADVSPANLF PDHFGQEDLM SALLKQQEGI APAENEFDFD 660 GYSMDNIPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 0.0 | ARR-B family protein |