PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022740964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB | ||||||||
Protein Properties | Length: 265aa MW: 30638.9 Da PI: 6.2593 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.3e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ +Ed++l ++++++G g W++ +++ ++R++k+c++rw +yl XP_022740964.1 14 RGAWSLQEDKILTNYIELHGEGKWRSLPQKACLNRCGKSCRLRWMNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.2e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE++l+v+++++lG++ W++Ia +++ gRt++++k++w+++ XP_022740964.1 67 RGNISPEEEDLIVRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNSV 111 7899******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MGRKPCCFKE GVNRGAWSLQ EDKILTNYIE LHGEGKWRSL PQKACLNRCG KSCRLRWMNY 60 LRQGIKRGNI SPEEEDLIVR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNS VLSKKVNGDV 120 SKRSNKQLYE CVSKESVENY RSGITTNVIA PKATRCTKML LSLDKGKHLM NDQCHPPAST 180 IVDDDELKLE SHNEVHEMPY VEDEPLIDNV LTMPNAFDYL DFSQTRINDI FEKSNMLETD 240 LAPMFEMEFE NLASLLGLED EWRDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 3e-59 | MYB family protein |